Hafnia alvei: AT03_10090
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Entry
AT03_10090 CDS
T03425
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hav
Hafnia alvei
Pathway
hav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT03_10090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hav03400
]
AT03_10090
Enzymes [BR:
hav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AT03_10090
DNA repair and recombination proteins [BR:
hav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AT03_10090
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AIU72700
UniProt:
A0A097R1U7
LinkDB
All DBs
Position
complement(2196406..2197215)
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AA seq
269 aa
AA seq
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MKFISFNINGLRARPHQLEAIIAKHQPDVIGLQETKVHDDMFPLADLEHLGYHIFYHGQK
GHYGVALLTKEKPLAVRKGFPTDEEDAQRRIIMADIATPTGVLTVINGYFPQGESRDHPI
KFPAKTKFYQDLQNYLESEQTPAGQVIVMGDVNISPTDDDIGIGEENRKRWLRTGKCSFL
PEEREWMDRLKNWGLIDTYRQANPERNDQFSWFDYRSKGFDDNRGLRIDLVLASQPLAEK
CIDTGIDYEIRGMEKPSDHAPIWAEFKLA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatctcttttaatatcaatggactgcgtgcccgtccacatcaacttgaagcc
atcatcgcaaaacatcagcctgatgtgattggcctgcaagaaaccaaagttcacgatgat
atgttcccgctggctgatttagagcatctgggatatcacattttctatcatggtcagaaa
ggacattacggcgttgcattgctgacgaaggaaaaaccactggccgtacgcaaaggcttt
ccaaccgatgaagaagatgcgcagcgtcgtatcattatggccgatattgctacgccgacc
ggcgtgctcacggttatcaacggttattttcctcagggcgaaagccgtgaccaccctatc
aaattcccagcaaaaactaagttctatcaagatttgcagaactatcttgagtctgaacag
acccctgcgggacaagtgatcgtgatgggtgacgtaaacattagcccaaccgatgatgat
attggtattggcgaagaaaaccgtaagcgttggttacgcaccgggaaatgttcattctta
cccgaagagcgcgaatggatggatcgcctgaaaaactggggactcattgatacctatcgc
caagctaaccctgagcgtaacgatcagttctcatggtttgactaccgctcaaaaggcttt
gatgacaaccgtggtctgcgcatagatttagttttggcaagccaaccgctcgctgaaaaa
tgcatcgacaccggtatcgattacgaaattcgcggaatggaaaagccgtctgatcatgcg
ccaatttgggctgagtttaagctggcgtga
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