Hafnia alvei: AT03_16935
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Entry
AT03_16935 CDS
T03425
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
hav
Hafnia alvei
Pathway
hav00250
Alanine, aspartate and glutamate metabolism
hav00310
Lysine degradation
hav00350
Tyrosine metabolism
hav00650
Butanoate metabolism
hav00760
Nicotinate and nicotinamide metabolism
hav01100
Metabolic pathways
hav01120
Microbial metabolism in diverse environments
Module
hav_M00027
GABA (gamma-Aminobutyrate) shunt
hav_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AT03_16935 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AT03_16935 (gabD)
00310 Lysine degradation
AT03_16935 (gabD)
00350 Tyrosine metabolism
AT03_16935 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AT03_16935 (gabD)
Enzymes [BR:
hav01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AT03_16935 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AT03_16935 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AT03_16935 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
AIU74942
UniProt:
A0A097R896
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All DBs
Position
3673234..3674676
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AA seq
480 aa
AA seq
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MLRHQAYINGHWQSATDGRTFAVTNPANGETIAEVSDLSAHETEAAIRAAADALPAWRKQ
TAKQRSQTLQRWFQLIMQNQAELAELLSLEQGKPQSEAMGEIAYGASFIEWFAEEGKRVY
GETIPSPLPGRRISTIKQPVGVVAAITPWNFPNAMITRKVAPALAAGCTVVLKPAPETPL
SALALAALAHEAGIPAGVFNIVTGTDAAAIGQVLTQSSIVRKLSFTGSTRIGKLLMQQSA
ATVKKLSLELGGNAPFIVFDDADLDAAVQGALAAKFRNSGQTCVCANRILVQDGIYDEFA
QRLTRAVSELRVGPAIEPSSQQGPLINQAAIEKVQAHISNAVSHGAHILTGGEQHALGGL
FFQPTVISHVAESMRIAHEETFGPVAPLFRFRDEAEAIRLANQTESGLAAYFYSRDIGRI
YRVAEALESGMVGINEGLISNEVAPFGGIKQSGLGREGSRYGIEDYLEVKYLCFGGIENN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
ctgcttcgtcatcaggcttacattaatggccactggcaaagcgccactgatggacgcact
tttgcggtcactaatccggcaaacggcgagaccattgccgaagtcagcgatctatccgcg
catgaaaccgaagccgccattcgcgcagccgccgacgcactgccagcatggcgtaagcaa
acggcaaaacaacgcagccaaacgctgcaacgctggttccagttgattatgcaaaaccag
gccgaactagctgaattgcttagcttagagcagggcaaacctcagtccgaggcaatgggt
gaaattgcctacggtgccagctttatcgagtggtttgccgaagagggaaaacgcgtttat
ggcgaaaccattccttctcctttacccggtcggcgcatcagcaccatcaagcagcccgtt
ggcgtggttgccgctatcacgccatggaatttccccaacgcgatgatcacccgcaaagtt
gcacctgcactggccgctggctgcaccgtggtattaaaacctgcgccagaaacaccgcta
tcggcgctggcccttgccgctctggcacacgaagcagggatccctgccggtgtgtttaac
atcgtcaccggcaccgatgcggcggcgattggtcaggtattaacgcaaagctcaatcgta
cggaagctctcatttaccggctctacgcgcattggcaagctactgatgcaacaaagcgcc
gccacggtgaaaaagctctcactagagctcggtggcaacgcgccgttcatcgtttttgac
gacgcagaccttgatgccgctgtccaaggtgctttagcggcgaagtttcgcaacagcggg
caaacctgtgtgtgcgccaaccgcattctggtgcaagacggcatctacgatgaatttgct
cagcgtttgactcgcgccgttagcgaactgcgcgttggccctgcgattgaaccatcctcc
caacaaggtcccttaattaatcaagcggcgattgaaaaggtgcaggcgcacatcagcaac
gccgtttcgcacggcgcacacattcttaccggcggggaacaacacgcgctgggcggcctc
tttttccagccgaccgttatcagccatgtcgccgaatccatgcgcattgcgcatgaagaa
accttcgggcctgtcgctcccctcttccgttttcgcgatgaagcagaagctattcgctta
gcgaatcaaactgaatcaggcctcgccgcctacttctactcacgcgacatcgggcgtatt
tatcgcgttgccgaagcgctggaaagcggaatggttggcatcaatgaagggctgatttca
aacgaagtcgcgccgtttggtgggattaaacaatcgggtttagggcgcgaaggttcgcgc
tacggaatcgaagattatctggaagtgaaatatctctgctttggcggaattgagaacaac
tga
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