Hafnia alvei: AT03_17735
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Entry
AT03_17735 CDS
T03425
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hav
Hafnia alvei
Pathway
hav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT03_17735 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hav03019
]
AT03_17735 (pcnB)
Enzymes [BR:
hav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AT03_17735 (pcnB)
Messenger RNA biogenesis [BR:
hav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AT03_17735 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AIU74955
UniProt:
A0A097R8B4
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All DBs
Position
3855735..3857129
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AA seq
464 aa
AA seq
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MFTRVANFCRKVLSREAESAQAEESRSMTVIPRDQHNISRQQISENALKVLYRLNKSGYE
AYLVGGGVRDLLLGKQPKDFDITTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVA
TFRGHHEHAGDGKNISQQAQNGMLLRDNVYGNIEEDAQRRDFTINSLYYSISDFTVRDYT
GGLRDLQEGRIRLIGDPETRYREDPVRMLRAVRFAAKLDMTICPQTGEPIPRLASLLHEI
PSARLFEESLKLLQSGYGFATYTLLCEYQLFQPLFPVIARHFTPNGDSPMERIINQVLKN
TDHRLQNDMRVNPAFLFAAMLWYPLIELAQKINDESGLTYYDAFALAMNDILDEQCRTLA
IPKRITALVRDIWSLQLRLSRRQGKRAHKLMEQPKFRAAFDLLALRAQAENNHELQRLTQ
WWDEFQKAPLTRQKSMANELGDDGVRRRPRRPRRRAPRREGSSE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtcgccaacttttgccgtaaggttttaagccgagaggcggagagcgca
caagcggaggagtcacgttcaatgacggtgatcccgcgcgatcaacataacatttcgcgc
caacaaatcagtgagaacgccctcaaggttctctatcgcctgaacaaatcaggatacgaa
gcgtatctggttggtggtggcgtgcgcgatctgctgctcggtaaacagcctaaagatttt
gacatcaccaccagcgcgacgccggaacaagtgcgtaaactgttccgtaattgccgtctc
gttggccgccgcttccgcttggcccatgtgatgttcggccctgaaattatcgaagttgcc
accttccgtggccaccatgaacacgccggtgatggcaaaaatatctcccagcaggcccag
aacggcatgctgctgcgcgacaacgtctatggcaacatcgaagaagatgcccagcgtcgc
gatttcaccatcaacagcctgtattacagtatttcagatttcacggtgcgtgattacacc
ggcggcctgcgtgatttgcaggaaggccgtattcgcctgattggcgatcctgaaacgcgc
taccgcgaagatcctgttcgcatgctgcgtgcggtgcgctttgctgccaaactggacatg
actatctgtccacaaaccggcgaaccgatcccacgtttagcttcattgctgcatgagatc
ccatcggctcgtctgtttgaagagtcgctgaaactgctgcaatccggctatggttttgca
acttacacgctgctgtgcgaataccagttgttccaaccgttattcccagtgattgcgcgc
catttcacgccaaacggcgatagcccgatggaacgcatcatcaatcaggtgctgaaaaac
accgatcatcgtttgcaaaacgatatgcgcgtgaatccagcattcctctttgcggccatg
ctgtggtatccgctgattgagctggcgcagaaaatcaatgacgaaagcggtctgacctac
tacgacgcttttgcattagcgatgaacgatattctggatgagcaatgccgcacgctggct
attccaaaacgtattaccgcattagtgcgtgatatttggtcattgcaactgcgcttatct
cgccgtcagggcaaacgtgcgcataaactgatggaacaaccgaagttccgcgcggccttt
gatctgctggcgctgcgcgctcaggcagagaataaccatgagctgcagcgtttgacacag
tggtgggacgagttccagaaagcgcctctgacacgtcagaaaagcatggcgaatgagctg
ggcgatgatggtgttcgccgccgtccgcgtcgcccacgtcgtcgcgcaccgcgccgtgaa
ggcagcagcgaatga
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