Hafnia alvei: AT03_18550
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Entry
AT03_18550 CDS
T03425
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
hav
Hafnia alvei
Pathway
hav00250
Alanine, aspartate and glutamate metabolism
hav00310
Lysine degradation
hav00350
Tyrosine metabolism
hav00650
Butanoate metabolism
hav00760
Nicotinate and nicotinamide metabolism
hav01100
Metabolic pathways
hav01120
Microbial metabolism in diverse environments
Module
hav_M00027
GABA (gamma-Aminobutyrate) shunt
hav_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AT03_18550 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AT03_18550 (gabD)
00310 Lysine degradation
AT03_18550 (gabD)
00350 Tyrosine metabolism
AT03_18550 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AT03_18550 (gabD)
Enzymes [BR:
hav01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AT03_18550 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AT03_18550 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AT03_18550 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIU74200
UniProt:
A0A097R651
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All DBs
Position
complement(4038609..4040057)
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AA seq
482 aa
AA seq
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MQLNDSTLFRQQAFIQGKWCDAESKKTIEVTNPANAQLLGTVPKMGANETRAAIEAANQA
LPAWRALTAKERATILRRWFDLMMANQDDLAKLMTLEQGKPLAEAKGEIAYAASFIEWFA
EEGKRIYGDSIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAQRAGIPDGVFNVVTGSASEVGNELTGNPLVRKLSFTGSTEIGRQ
LMQQCAKDIKKVSLELGGNAPFIVFDDADLDKAVDGALASKFRNAGQTCVCANRLYVQDG
VYDAFAKKLQAAVEKLTLGDGLAQGVTTGPLIDEKAVAKVKEHIEDALSKGARIITGGQP
HELGGNFFQPTILVDVPASAKVAKEETFGPLAPLFRFKDEADVVAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaacgactcaacgctttttcgccagcaggcttttatccaaggaaagtggtgt
gatgcagaaagtaagaaaactatcgaggtgacaaaccccgctaatgctcagcttttgggc
accgtgcccaaaatgggagcaaatgaaacgcgcgcggcgattgaagccgccaatcaggcg
ttgccggcatggcgtgcgttaaccgccaaagagcgtgcgacgatcctgcgccgctggttt
gatctcatgatggctaaccaagacgatctcgccaagctcatgacgctagagcagggcaaa
ccgttggctgaggccaagggtgagatcgcctatgccgcctcttttattgagtggtttgcc
gaagaaggtaaacgcatttatggcgattccattccaggtcatcaggcagacaaacgcctc
atcgtgatcaaacagccgattggcgttaccgcggcgatcactccgtggaactttccagcg
gcaatgatcacgcgtaaagcagggcccgcgcttgccgctggctgcaccatggtgcttaaa
cctgcgagccaaacgccgttttcagcattagctcttgcggagttggcccagcgtgcaggg
atacccgacggcgtatttaacgtggtaaccggctcggccagcgaagtgggaaatgaactc
acgggcaacccgttagtgcgcaaactctcgtttaccggatcgaccgaaattggtcgtcaa
ctgatgcaacagtgcgccaaagacatcaaaaaagtctcgctggagctgggcgggaatgcg
ccattcatcgtgtttgatgatgctgatttggataaagcggttgacggtgcgctggcctct
aagttccgtaatgcgggacaaacctgtgtgtgtgccaaccgcctgtatgttcaggatggg
gtttatgacgcttttgctaaaaagctacaggctgcggttgaaaaactcacgctgggcgat
ggcttagcgcagggcgtaacaaccggcccgctgattgatgaaaaagcggtggcgaaagtg
aaagagcatattgaagatgcgctgtcgaaaggggctcgcattatcaccggcggccagccg
cacgaattaggcggcaatttcttccagcccaccattttagtggatgttcctgcgagcgcc
aaagtcgccaaagaagagacttttggcccgttggctccattattccgttttaaagatgaa
gcagacgtggttgcacaggccaatgataccgaatttggcttggcggcttatttttatgcg
cgcgatcttagccgcgtattccgcgttggcgaagcgctggagtacggcatcgtggggatc
aacaccggcattatttcgaatgaagtcgcgccttttggcgggatcaaagcctcaggcctt
ggccgcgaaggctcgaagtatggcatcgaagattatctcgaaatcaaatatatgtgcatc
ggcttgtaa
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