Hafnia alvei: AT03_18755
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Entry
AT03_18755 CDS
T03425
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hav03400
]
AT03_18755
DNA repair and recombination proteins [BR:
hav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AT03_18755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
GvpD_P-loop
RecA_N
AAA_22
SLFN-g3_helicase
Rad51
ABC_tran
AAA_14
AAA_16
nSTAND_NTPase5
nSTAND3
NTPase_1
AAA
AAA_24
cobW
Zn_ribbon_Thio2
Zeta_toxin
AAA_29
AAA_5
Viral_helicase1
DZR
PAXNEB
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AIU74235
UniProt:
A0A097R688
LinkDB
All DBs
Position
complement(4086961..4088343)
Genome browser
AA seq
460 aa
AA seq
DB search
MAKAIKRAFVCNECGADYPRWQGQCSACQAWNSITEVRLAASPAVARAERLSGYAGDAGV
SKVQKLSDISLEALPRFSTGFAEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLS
QQMKTLYVTGEESLQQVAMRAHRLGLPTEGLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGEEITSGSSV
MVVWEGTRPLLVEIQALVDTSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETGADLALLMSLVSSLRDRPLPQDLVVFGEVGLAGEVRPVTSGQERISEAA
KHGFKRAIVPHANMPKKPLPNMQVFGVKKLSDALDVLQDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagcaattaaacgagcctttgtctgcaacgaatgtggtgctgattacccacgt
tggcaggggcagtgcagcgcctgtcaggcgtggaatagcattactgaagtacgtttggcg
gcttcgcctgcggtggcgcgcgcggaacggttgtctggctatgcgggtgatgccggcgtt
agcaaggtgcaaaaactctcggatatcagccttgaggcgttgccccgcttttcaaccgga
tttgctgagtttgaccgcgtattaggcggcggcgtggtgccgggcagtgcgattctgatc
ggtggtaaccccggcgcggggaaaagtacgttgctgctgcaaaccctgtgtaaattatct
cagcaaatgaaaacgctgtatgtcaccggggaagagtcgttgcagcaggtcgcgatgcga
gcgcaccgtttgggcctgcccactgagggcttgaatatgctgtcagaaaccagcattgag
caaatttgcctgatcgcggaacaagagcagccgaagctgatggttatcgactccattcag
gtgatgcacatggcagacattcaatcgtcgccgggcagcgtggcgcaggtacgtgaaacg
gcggcgtatttgacccgttttgccaaaacgcgcggcgtggctatcgtgatggtgggccat
gtgaccaaagacggctcgctggcggggccgaaagtgctggaacactgtatcgactgctcc
gtgctgttagatggggacgcggattctcgttttcgcaccctacgtagtcataaaaaccgt
tttggcgccgtgaacgaactgggcgtatttgccatgacagagcaggggctgcgtgaagtg
agtaacccttcggctatcttcttgagccgtggcgaagaaattacctccggaagctctgtt
atggtggtatgggaaggtacgcgcccgctgttggtggagattcaggcgctggtggatacc
tcgatgatgtcaaacccgcgccgcgttgcggtggggctagagcaaaaccgtttagcgatt
ttgctggcggtattacatcgtcatggtggcttgcagatggccgatcaggacgttttcgtg
aacgtggtcggtggcgtgaaggtgacggaaaccggcgcagacctcgcactgctgatgtct
ttagtctctagcctgcgcgatcgtccgttgccgcaggatttagtggtatttggtgaagtg
gggctggcgggagaagttcgtccggtgaccagcggtcaggagcgcatttctgaggcggca
aaacatggctttaaacgcgccatcgttccacatgccaatatgccgaaaaagccgttgccg
aatatgcaggtttttggggtgaaaaagctatctgacgccttggatgtcttgcaagattta
tga
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