Hafnia alvei: AT03_20450
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Entry
AT03_20450 CDS
T03425
Name
(GenBank) transcriptional regulator
KO
K07592
LysR family transcriptional regulator, tdc operon transcriptional activator
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hav03000
]
AT03_20450
Transcription factors [BR:
hav03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AT03_20450
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_28
PBP_like_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AIU74539
UniProt:
A0A097R750
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Position
4466856..4467767
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AA seq
303 aa
AA seq
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MKYLPKIQQLKTFQEVIRRGSIRAAARALNQSQPAISRAIKELEHTLNTQLIVRGAKGMM
LTETGSAFAARSQLILEELQRAADEIEQISQYSQGSVSVGFSSLIALTVFPQAADTFKSQ
FPQANIHAKEAQLSTLLPALREGRLDFAIGTLTAETTPIDLVREPLFESPFCIIAHRDNP
FAQAKSLEELKHAKWLIPETDMGYYQQLESAMGNFYHQLSQSPIRTDSVVCGLSLVQQAQ
YLTIVALAMREPLGLGNTLCALPIDDLPTAQYCVFYSQKSPLTLTARRFLDLLRWECQNY
AWE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatatctgccaaaaattcagcagctaaaaacgtttcaggaagtgattcgtcgagga
agtattcgcgccgccgcgcgcgcgttaaaccagtcacagcctgcaataagcagagcaatc
aaagaattggaacatacgctgaatacgcagcttatcgtgcgcggagccaaaggaatgatg
ctgactgaaacaggaagcgcgtttgcggcacgctcgcagcttattttggaagaattacag
cgagcagcagatgaaattgagcagataagccaatattctcaaggttcagtgtctgtaggc
ttttcatcgctgattgcgctaaccgtgtttcctcaggccgctgatacctttaagtctcag
tttccacaggccaatatacacgccaaagaagcgcagctctcgacgcttctaccggccttg
cgtgaagggcgactcgattttgccatcggcacgctaacagccgaaaccacgcccatagac
ctggtacgtgagccgctgtttgaatcgcccttttgcattatcgctcaccgcgacaaccca
tttgctcaagcgaaatcgttagaagagctgaagcacgcaaaatggctgatacctgaaacc
gatatgggttactaccagcagctagaatcagctatggggaatttttaccaccagcttagc
caatcacccatccgaacggactccgtggtttgcggattaagcctggtgcaacaagcacaa
tatctgaccatcgtggctctggcgatgcgggaaccgctgggattaggcaatacgctctgt
gcattgcctatcgacgatttacccaccgcccagtattgcgtgttctattcacaaaaatcg
ccgctgaccttaacggcgcggcgattcttggatttattacgttgggaatgccaaaactat
gcttgggagtaa
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