Hafnia alvei: AT03_20460
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Entry
AT03_20460 CDS
T03425
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
hav
Hafnia alvei
Pathway
hav02020
Two-component system
hav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AT03_20460
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AT03_20460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hav03000
]
AT03_20460
Transcription factors [BR:
hav03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
AT03_20460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
MarR
HTH_24
HTH_23
MarR_2
Sigma70_r4
HTH_36
HTH_11
HTH_7
Asp1
RPA_C
Motif
Other DBs
NCBI-ProteinID:
AIU74541
UniProt:
A0A097R755
LinkDB
All DBs
Position
4468510..4469142
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AA seq
210 aa
AA seq
DB search
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQ
MASRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEDQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttctcggcaaaccgcaaacagacccgactcttgaatggttcttgtctcattgccat
atccacaagtatccgtccaaaagtaccctgatccaccaaggtgaaaaggctgaaaccctg
tactacatcgttaagggctccgttgctgtattgattaaagatgaagaaggcaaagaaatg
atcctttcttatctcaatcagggcgatttcattggtgaactaggcttatttgaggaaggg
caagaacgtagcgcctgggttcgtgcaaaaaccgcctgtgaagtggctgaaatttcttac
aagaagttccgccagctcattcaggtcaatccagatattctgatgcgcctgtctgctcag
atggctagccgtttacaggttacctctgaaaaagtcggcaaccttgcattcttggacgta
accggtcgtatcgctcagaccctgctgaatctggccaaacagccagatgccatgactcat
ccagatggtatgcagatcaagatcactcgtcaggaaattggccagatcgttggctgctcc
cgtgaaaccgttggtcgtattctgaagatgctggaagatcaaaatctgatctccgcacac
ggaaaaaccatcgtcgtttacggcactcgctga
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