Hafnia alvei: AT03_20475
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Entry
AT03_20475 CDS
T03425
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hav03400
]
AT03_20475
DNA repair and recombination proteins [BR:
hav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AT03_20475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
ResIII
TrwB_AAD_bind
FtsK_SpoIIIE
T2SSE
AAA_30
AAA_16
SLFN-g3_helicase
AAA_19
AAA_7
CbiA
Hydrolase
SRP54
AAA_28
AAA_6
P-loop_TraG
nSTAND3
DUF4007
Motif
Other DBs
NCBI-ProteinID:
AIU74544
UniProt:
A0A097R754
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Position
4472707..4474236
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AA seq
509 aa
AA seq
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MSAPLTIAKNQKVTLQLLPALANRHGLITGATGTGKTVTLQKMAEQFSRIGVPVFLADVK
GDLSGIAAAGTPSDKLQKRLDALQVTDWSPQACPIIPWDIFAEKGHPIRATVSDLGPLLL
SRLLDLNDVQSGVLQLVFKIADDSNLLLLDMKDLRAVVQFVGDNAKQFTTQYGNISTASI
GAIQRGLLTLDQQGGDHFFGEPMLDIKDLMRCDANGQGIINLLAADKLINQPKLYSVFLL
WLLAELFEQLPEVGDVEQPKLVFFFDEAHLLFNDAPSALLDKIEQVVRLIRSKGVGIYFV
TQNPLDIPDNVLGQLGNRVQHALRAFTPRDQKAVKAAAQTLRANPEFSTEQAITELGVGE
ALVSFLDESGRPTIVERAMVIAPESRMGPLTADELNHALNHSPLYGRYDEAVDRESAYEK
ITQQGFSTVESGDEKASADDVKKPEANAQEGGGLMGSLNEILFGTTGPRGGKKDGVVQTA
AKSMARQVGSSLGRQILRGVLGSIMGGRK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccgcttaccattgctaagaatcaaaaagtcacgctgcaactacttccggcg
ctggccaaccgccacggactgattaccggcgcaacgggtacggggaaaaccgtgacccta
caaaaaatggcagagcagttctctcgtattggtgttcccgtatttttggccgacgtaaag
ggcgacttatccggcatcgccgctgccggcacgccttccgataaattacagaaaagatta
gatgctttgcaggtgaccgactggtcgccgcaggcgtgtccgatcattccgtgggatatt
tttgccgaaaaaggtcatcctattcgtgccacggtgtcagatttaggcccgctgttgcta
tctcgcctgctggacttaaacgacgtgcaatccggcgtgttacaactggtgtttaagatt
gccgatgacagcaacctgctgctgctcgatatgaaagacctccgcgccgtggtgcagttt
gtgggggacaatgccaaacagttcaccacccagtatggcaatatttctaccgcgtctatt
ggcgcgattcagcgcggattactgacgctggatcagcaaggcggcgatcatttctttggc
gagccgatgttggatattaaagatctgatgcgctgcgacgccaatgggcaaggcattatt
aatctgctggccgccgacaaactgatcaatcagccgaagctctactcggtattccttctg
tggctactggcggagttatttgaacagctacctgaggtcggtgacgttgagcaaccaaag
ctggtgttcttcttcgatgaggctcatttgctgtttaacgacgcgcctagcgccctactg
gataaaatagaacaggtcgtgcgcttaatccgttctaaaggtgtcgggatctatttcgtc
acccagaacccactggatatccctgacaacgttctcggccaactgggcaatcgcgttcaa
catgcgctacgcgcgtttaccccacgcgatcaaaaagccgtgaaagctgcagcgcaaacc
ctgcgcgcaaatcccgaattcagcaccgagcaggccattaccgagctgggcgtaggcgaa
gcattagtttcattccttgatgaaagcggccgcccaaccatcgttgagcgcgcgatggtt
atcgcacccgaatcccgtatggggccgttaaccgccgatgaattgaatcacgccctaaat
cactcaccgttatatggccgctatgacgaagccgtcgatcgtgaatctgcctatgaaaaa
atcacccagcagggcttcagcacggttgaaagcggggatgaaaaggccagcgctgacgac
gtaaaaaaaccagaggccaacgcgcaagaaggcggaggattgatgggcagcttgaatgaa
attctgttcggcaccaccggccctcgcggcggtaagaaagatggcgtggtacaaaccgcc
gcaaaaagcatggcgcgtcaggtaggaagctcgctcggccgccaaattttacgcggcgtt
ttaggctcgattatgggcgggcgtaaataa
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