Hafnia alvei: AT03_20860
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Entry
AT03_20860 CDS
T03425
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hav03021
]
AT03_20860
Transcription machinery [BR:
hav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AT03_20860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
KORA
UCR_14kD
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
AIU74613
UniProt:
A0A097R7B0
LinkDB
All DBs
Position
complement(4563016..4563867)
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AA seq
283 aa
AA seq
DB search
MTKEMQTLTLVPQGSLEAYVRAANTYPMLTAEEEKELGERLHYEGDLDAAKQLILSHLRF
VVHVARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEMGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVSEKDVLEMESRMAAQDM
AFDMSNDDDDSSPAAPVLFLQDKSSDFANDIEDDNWDSHAADKLSLAMEGLDERSQHIIR
ARWLDDDNKATLQELADQYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagagatgcaaactttaaccttagttcctcaaggtagcttggaagcttacgtt
cgtgcggccaacacctatccgatgctgacagcagaggaagagaaagaactgggtgaacga
ctgcattacgagggtgacttggatgcagcaaaacagctgattctgtcgcacctgcgcttt
gttgttcatgttgcccgtaactatgccggctacgggttgccgcaggcagacctgattcag
gaaggtaacatcggcctgatgaaagctgtgcgtcgttttaacccagaaatgggtgtacga
ctggtgtcctttgcggttcactggatcaaagctgaaattcacgaatacgtgctgcgtaac
tggcgcatcgtgaaggttgcgaccaccaaagcccagcgtaagctgttcttcaacctgcgt
aaaaccaagcagcgtttaggctggttcaatcaggacgaagtggaactggttgctcgcgag
ctgggtgtgtctgaaaaagacgtgctggaaatggaatcacgtatggccgcgcaggacatg
gcttttgacatgtctaacgacgacgatgacagttcacctgctgcgccagtgctgttcctg
caggataaatcttctgatttcgctaacgatatcgaagatgacaactgggatagtcacgcc
gccgataagctgagcttggcgatggaaggcttggatgagcgtagccagcacattatccgt
gcccgctggttagacgacgacaacaaagcaacgctgcaagaactggccgatcaatacggt
gtgtctgcagagcgtgtgcgtcagcttgaaaagaacgcaatgaaaaaactgcgtgcagca
attgaagcctaa
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