Helicoverpa armigera (cotton bollworm): 110369692
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Entry
110369692 CDS
T05609
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03013
Nucleocytoplasmic transport
haw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110369692
09122 Translation
03013 Nucleocytoplasmic transport
110369692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110369692
03041 Spliceosome [BR:
haw03041
]
110369692
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110369692
Spliceosome [BR:
haw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110369692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
NBCH_WD40
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_ACSF4
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
PQQ_2
Beta-prop_RIG_2nd
CBM_19
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
BBS2_Mid
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
110369692
NCBI-ProteinID:
XP_063892349
LinkDB
All DBs
Position
9:join(10742091..10742194,10742303..10742695,10742961..10743123,10743765..10744085)
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AA seq
326 aa
AA seq
DB search
MLDKILYNTVLSQTLSPCGKYLVAGNIYSQIAVFDLDRILNPVVELLTSDYNKPKYIHTL
ESGRQVCSLTTTEKFLVVGTVNEIFGWDWKNVASSKLSKPSWVIRVPSQSSSLEQTDVNS
LWLSGDEAKLYAGCGDNNVYVFNMEDGRLLSTLKGHTDFIHSIDGKNQQLITASEDGTVM
LWDRRTCSSHNKLEPHANSKVSRPDIGKWVGSVALGDDWIVCGGGPRLSLWHLRSLDAVT
VFDIPDHGIHVSFFHDDCVFAAGAAKHLYQLSYSGEVKVELPVSATTVYSAVLSTSPNKV
LAIAGSSPEIDLCTTFNYRDQVLHFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaaaattctgtataacactgttctctcacaaacattgtcgccctgcggcaaa
tatttagttgccggtaatatttacagtcagatcgctgtttttgatttggatcgaatactc
aatcctgttgtcgagctacttacttctgactacaacaagccgaaatacatccacacccta
gaatcagggcgccaagtatgcagcctgacgactaccgaaaagtttttagttgttggaaca
gtaaatgagatctttgggtgggactggaagaatgtggccagttctaagcttagcaaacct
tcttgggtgattagggtgccttcccagtcgtcatcgctggagcagactgatgtgaatagt
ctatggttgtcaggagatgaggctaagctgtatgcaggttgcggagataataatgtctat
gtttttaatatggaagacgggagattgctgtctactttgaagggacatactgatttcata
cattctattgatggcaagaaccagcaactaattactgcaagtgaagatggtacagtaatg
ctgtgggatagacgcacttgcagcagtcacaacaaactggagccccatgctaacagcaaa
gtgagccgtcctgacatcggcaagtgggtgggctctgttgctttgggtgatgactggatt
gtttgcggcggcggccctcgcctatccctatggcacctccgttccctggatgctgtcaca
gtcttcgacatccctgaccacggtatccacgtgtcattcttccacgacgactgtgtcttc
gcggcaggagcggccaaacacctctaccagctcagctactcaggagaagtgaaggttgaa
ctaccagtctcagcaacgacagtgtactcagcggtactgagtacaagccctaacaaagtc
ctagccattgccggatctagccccgagatagatctatgtaccaccttcaactatagagat
caggtactacacttccgatag
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integrated database retrieval system
