Helicoverpa armigera (cotton bollworm): 110369933
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Entry
110369933 CDS
T05609
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110369933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110369933
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110369933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
110369933
NCBI-ProteinID:
XP_021181250
LinkDB
All DBs
Position
5:join(4124492..4124638,4124858..4125079,4125493..4125676,4126530..4126673,4126767..4126840,4126958..4127093,4127505..4127791,4128183..4128250,4129126..4129330)
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AA seq
488 aa
AA seq
DB search
MADAAVETAPGDENDDSWLYGESNPDQVSDKPQEGNEKDQQKDVADAATEGEDKDQEENE
AANDDSHFNDEHFAEVARDGEERNGDADSQNNGDSDSDDSDDIKVTIGEIKSGPQAYASL
NIKRGVGLVATGAGDKPRGGTTTGGKVTLEDLDGPGSINGVPALEFNIDTIEDKPWNKPG
ADISDYFNYGFNEVTWSAYCERQRRMRVNEAGVGLHVGAPPRPPPPDLRRPPGPSRNDEG
MPPAMANNYQSRENTIQVMTAERREYGRSGHQRDMGAPDYFGPPPSDHYYPPPPHAPYEE
PWGHPEQSGWAPSEIKELTPGPMGPPVGPPMGMGQPLGPPHMSAPPHMMPAPPYVSPYRP
HPPPHMHDRDRDRDRDRDRDRMRERDDRDRRDRDRRDEEERDRDRERDRSRSIKPDRIRE
KSYRRERSRSRSRRHKSRSRSPRQRERSRDRERSRERERDRSRDRERSRDRERSVKPKTK
DKEKDDDK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctgccgttgaaacggcaccaggagatgaaaatgatgatagttggttatac
ggtgaatcaaatcctgatcaggtatcggataaacctcaagagggtaacgaaaaagaccag
caaaaagatgtagctgacgccgcaactgagggtgaggacaaagaccaggaggagaacgag
gcggctaatgatgactctcacttcaacgacgagcatttcgcggaggtggcgcgcgatggc
gaggagcggaacggagacgccgacagccagaacaacggagactcggactcggatgatagc
gatgacatcaaagtcaccatcggggagatcaagtcgggaccacaggcttatgctagcctc
aatatcaaacgtggtgtcggtcttgtagcaactggtgctggggacaagcctcgtggtggt
accaccacgggtggtaaagtaacattggaagatttagacgggccgggcagcatcaatggt
gtgcctgctctagagtttaacattgacaccattgaagacaagccatggaacaaacctgga
gctgatatatctgattatttcaactatggtttcaacgaggtaacgtggagcgcgtactgc
gagcggcaacgacgcatgcgcgtcaacgaggcgggcgtcggcctgcacgtgggggcgccg
ccccgcccgccgccgcctgacctcaggagaccgccgggccctagcagaaatgatgaaggc
atgccacctgccatggcaaacaattaccaatctagagaaaatactatacaggtgatgaca
gcagagcgtcgcgagtacgggcgcagcgggcaccagcgcgacatgggggcgccggactac
ttcgggcctccgcccagcgaccactactacccgccgcctcctcacgcgccctacgaggaa
ccttggggtcatcctgaacagagtggctgggctccaagtgaaataaaagagttgacgccg
ggcccgatgggtccgccggtggggccgcccatgggcatggggcagccgctcggcccgccg
cacatgtcggcgccgccgcacatgatgcccgcgccgccctacgtgtcgccctaccgcccg
cacccgccgccgcacatgcacgaccgagaccgagaccgcgaccgcgaccgcgaccgcgac
cgcatgcgggagcgagacgaccgcgaccgccgagaccgcgaccgcagggatgaggaggag
agagatagagacagggaacgagatcgctctcgttcgatcaagcctgataggataagggaa
aaatcatacagacgcgagaggtcgcgttcgcggtcacgccgtcacaagtcgcggtcgcgc
tcgccgcggcagcgcgaacgttcgcgcgaccgggagcgctcgcgtgagcgagagcgggac
cgctccagggaccgcgagcggtcgcgcgaccgagaacgtagtgtcaaacccaagacaaag
gataaggaaaaagatgacgacaaatag
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