Helicoverpa armigera (cotton bollworm): 110369948
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Entry
110369948 CDS
T05609
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110369948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haw03021
]
110369948
Enzymes [BR:
haw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110369948
Transcription machinery [BR:
haw03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110369948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
110369948
NCBI-ProteinID:
XP_021181281
LinkDB
All DBs
Position
9:complement(join(7185890..7186106,7186562..7186725,7187102..7187238,7187315..7188109,7188190..7188648,7188733..7189096,7189194..7189578,7190750..7190937,7191160..7191335,7191543..7191655,7191766..7192097,7192391..7192465))
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AA seq
1134 aa
AA seq
DB search
MGEINKRQNDWDSSKGSREPIKTVEDKWKLVPSFLQVKGLVKQHIDSFNYFINVEIKKIV
QANEKVFCDADPLFYIKYLNAYVGTPDLEEGYNVTKPTTPHECRLRDMTYSAPITVDIEY
IRGNQRVIKNKQLIGRMPLMLRSSNCVLTNKSDFELAQLNECPHDPGGYFIIRGQEKVIL
IQEQLSRNRMIVDEFMGAIQCQVTSSTHEKKTRTNVIVKNGKYVLRHNALSDDIPIAVAF
KAMGICSDQEIMQLIGTDDTSLKKMAPCIMDCHNLKIFTQNQALAYIGSKLKVKRFQSGN
AKVRTPVDEARDLLATTILAHVAVENFNFYVKAIYLAIMVKRVIEAETNKAAIDDPDYYG
NKRLELAGSLLALMFEDLFKRFNWELKSIADKIIPKVKAAPFDVVKHMRPDLIANGLFAA
ISSGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGM
LCPSDTPEGEACGLVKNLALMTHITTECSEEPIARLARNAGVEDVRLLGGEEINHPAVYM
VFLNGNILGVSRQYKRLIKVFRMFRRRGLISAFVSIYPNHNQRTVYICSDGGRLCRPYII
VEKGYPLVQQFHINELNRGIRKFQDFLNDGLIEYLDVNEENDSHIATVEAEIDPYVTTHL
EIEPFTILGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGTIGYNQKNRIDTLMYNLVYPQC
PMVKTRTIELTNFDKLPAGQNATVAVMSYSGYDIEDALILNRASIDRGYGRCLVYKSAKT
TMKRYSNQTSDRILGPSRDATTGKVIRAHEILDTDGIAAPGEMVENRQVLINKQMPPATL
STVTQGQPQQVDYKDVPITYKGPVESYIEKVMVSSNSEDAFLIKILLRQTRIPEIGDKFS
SRHGQKGVTGLIVQQEDMPFNDRGICPDMIMNPHGFPSRMTVGKTIELLAGKAGLMEGKF
HYGTAFGGSKVRDVCQELEKHGYNYHGKDIFYSGLTGEPLEAYIYSGPVYYQKLKHMVQD
KMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLASDAFSAD
ICGACGRLASRAWCHACHSSAAVSSVDMPYACKLLFQELASMNIVPKLTLKKYC
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgggggagataaataaaaggcaaaatgattgggactcctctaaaggttcgcgagaacct
ataaaaactgtagaggataaatggaaattagtgccatcttttctacaagtaaagggatta
gtaaaacagcacattgattcctttaactattttataaatgttgaaataaagaaaatagtt
caagctaatgaaaaagtgttttgtgatgctgacccattattttacattaaatacctcaat
gcgtatgttgggacgccagatttagaagaaggttacaatgttactaagcccacaactcca
cacgagtgtaggcttagagacatgacatattcagcaccaataacagtagacatagagtac
attcgaggcaaccaacgggtcatcaagaacaaacagcttattggcagaatgccactgatg
ttgaggtcttctaattgtgttctgaccaataagtctgactttgagctagcacagctgaat
gaatgtccacatgacccaggcggttattttattatcagaggacaagaaaaagtgatattg
atccaagaacagctgtccaggaacaggatgattgttgatgaattcatgggagctatacaa
tgccaagttaccagttctactcatgaaaagaaaactagaactaatgttatagtgaagaat
ggcaaatatgtattgagacataatgctttatctgatgatattcctattgctgttgccttc
aaagctatgggtatctgtagtgaccaagaaattatgcaacttattggcactgatgatact
tcactgaagaagatggctccttgcattatggattgtcataatttaaaaatatttacccaa
aatcaagctctcgcctacattggaagtaaattgaaggtcaaaaggtttcagtcaggcaat
gccaaagtccgcactcctgttgatgaagccagggatcttctagcaacaactatcctagca
catgttgctgttgaaaacttcaatttctatgtaaaagctatttatctagctataatggta
aaaagggttattgaagctgaaaccaataaggctgctatagatgatcctgattactatgga
aacaagagacttgagcttgccggctctttactagctttaatgtttgaagatctgttcaaa
aggttcaattgggaattgaaatcaattgcagacaaaataatacctaaagtcaaagctgcg
ccatttgatgttgttaaacatatgagaccagatttgattgctaatggtctgtttgctgct
atttcttctggtaactggacgattaaaagattcaaaatggagaggcatggagtaactcaa
gtgctgagtcgccttagttacatatcagctttgggtatgatgaccagagtgaattctcaa
tttgaaaagacgaggaaggtatcagggccgcgatctctgcaaccttcccagtggggcatg
ttgtgtccttctgatactcctgaaggtgaagcctgcggtcttgtgaagaacttggcactg
atgactcacatcactactgagtgttccgaagaaccgattgcgaggctagcgcgtaatgca
ggcgttgaagacgttagactattaggcggcgaggaaattaaccacccagctgtgtacatg
gtgttccttaatggtaatattcttggagtttcaaggcaatacaaaaggcttataaaggtt
tttagaatgttccgacgacgtggcctcatatcggccttcgtttcaatttaccctaatcac
aatcagaggactgtctacatttgcagcgacggcggaaggctctgccgaccatatatcatt
gtagaaaagggttatccactagtacaacaattccatataaatgagttgaatagaggaatt
agaaagttccaagactttctcaatgatggactgatagagtacttagacgtgaatgaggag
aatgacagccacatagctaccgttgaagcagagatagatccatatgtcaccacgcattta
gaaattgagccattcaccatcctcggcgtttgtgctggccttgtcccttacccgcatcac
aatcagagtcctaggaatacctaccaatgtgctatgggtaaacaggcaatgggtacaatt
ggctacaatcagaaaaacagaatagatacgcttatgtacaacttagtatacccacaatgt
ccgatggttaagacgagaacaatcgagttgaccaattttgacaaactgccggctgggcag
aacgccacagtagccgtcatgagttacagcggctacgatattgaggacgcgttgattctg
aaccgagcgtccatcgaccgcgggtatggccggtgccttgtctacaaaagcgccaagacc
actatgaagagatacagcaatcaaacctccgataggattttgggcccttcgagagacgca
actacaggaaaagttattagagcacatgaaattcttgatactgatggcatagctgcaccc
ggcgaaatggttgagaatagacaagttttaataaataagcagatgccaccagctacttta
agcactgttacgcaggggcagccacaacaggtggattacaaggacgttcctatcacctac
aaaggtccagtcgagtcttacatagaaaaagttatggtgtcgtcaaactctgaagatgca
ttcctcattaaaatattgttacgtcaaacgcgtattccggagataggcgacaagtttagt
tcccggcacgggcagaaaggtgtgactggtttgattgtgcagcaagaagacatgccattt
aatgatcgaggcatctgtcctgacatgatcatgaacccacatggtttcccatctagaatg
actgtcggaaaaaccatcgaactgttagcaggaaaagctggcttgatggaagggaaattt
cactatggcactgcattcggcggttctaaggttcgcgatgtatgtcaggagttagaaaaa
cacggatacaactatcatggaaaggatatattttactctggattaactggagagcccttg
gaagcttatatttattctggtcctgtgtactaccagaaactgaagcacatggtacaggac
aagatgcacgctcgcgcccgcggcccgcgcgccgtgctcacgcgccagcccaccgaggga
cgctcgcgagacggcggcctgcgactcggggagatggagcgggactgtctcatcggatat
ggcgctagtatgttgctaatggaacgcctcatgcttgcatcggacgcgttcagtgctgac
atctgcggcgcatgtggtcgactggcgagccgcgcgtggtgccacgcctgccactcgtcc
gccgccgtctccagcgtcgacatgccctacgcctgcaagctgctcttccaagaactagcc
tccatgaatatcgtacccaagctcacgttgaagaaatattgctag
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