Helicoverpa armigera (cotton bollworm): 110370082
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Entry
110370082 CDS
T05609
Name
(RefSeq) uncharacterized protein LOC110370082 isoform X3
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110370082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haw03041
]
110370082
03009 Ribosome biogenesis [BR:
haw03009
]
110370082
Enzymes [BR:
haw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110370082
Spliceosome [BR:
haw03041
]
Complex A
U1 snRNP components
U1 related factors
110370082
Complex B
110370082
Ribosome biogenesis [BR:
haw03009
]
Eukaryotic type
Pre-60S particles
Helicases
110370082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
Cas3-like_C_2
SAM_DrpA
Motif
Other DBs
NCBI-GeneID:
110370082
NCBI-ProteinID:
XP_021181482
LinkDB
All DBs
Position
11:complement(join(12611202..12611332,12611410..12611556,12611664..12611993,12612084..12612242,12612335..12612563,12612637..12614074,12616218..12616252))
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AA seq
822 aa
AA seq
DB search
MQYNGFHNQHPIFRPRPDRNEQFGKIPFFNGMDFGGPKNFGPRNMGNKPNFRPRNDFNGM
RNEFNHKNENGGNQGDFGGPKDFNKMKNNYNNQPLKKNDYEADKAVGGNMQFYNNGKNDF
GGPKQGFPKNNYGPKNFNNQNGQQNFGPKKVFNPNNMQQNVDFNGKQRGKKTKHPGDSLV
KPMWDLSQLEPIQKDFYKPHANVEGRSDEEVQKFRVSKEITVSGNNVPRPNQVFDEGNFP
DHIISTIKEQGYAEPTGIQAQGWPIALSGRDMVGIASTGSGKTLAYMLPAAVHISHQQRI
QRGDGPIALILAPTRELAQQIQSVAQSYSARGTIRNTCLFGGSPKGPQARDLERGVEIVI
ATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW
PKEIQALAEDFLNDYVKVNIGSLNLSANNNIKQIIEVCEEHEKEIKLTNLLKEISQERDN
KVIVFVETKKKVDDIARAVRRRGHNALAIHGDKSQIERDAVLTEFRNGVNSILIATDVAA
RGLDVEDVKFVINFDYPNSSEDYIHRIGRTGRCQQSGTAYTYFTTGDARQARGLLAVLRE
TGQNPPTKLNDMARSNNNNSGRNRWQQRKENNSGASSPRQQNNQWNNKMANTNPEESQNT
YQNRGGNPQAPRFSNQNQGNQGYRQNNYQKQVPFPSPNVFESMGNYQGGYNNGYQNGYNG
QNGYGQRPYNNMRNGGQQYRNNNAGNKNNGTGSSYGSPPPHFATPQHYPQMHPHHQEMLG
GKFYGGGVGGGGPCGYQAAVGVSGPYAHLPPGSLLYAAPVQQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaacggattccacaaccagcatccgattttcagacctcgaccagaccggaat
gaacaattcggtaaaattccatttttcaatggaatggactttgggggccctaaaaatttt
gggccaagaaacatgggaaacaaacccaattttcggcccagaaacgattttaatggaatg
aggaatgaattcaatcacaaaaatgaaaatggtggaaaccagggcgattttggtgggcct
aaagatttcaacaagatgaaaaataattataataaccagcccctaaagaaaaatgattat
gaggcagataaggcagtaggtggaaatatgcagttttataacaatggcaaaaatgatttt
ggtggaccgaaacaaggtttcccaaaaaacaattatggtcccaagaatttcaataatcaa
aatggacagcaaaactttgggcccaaaaaagttttcaatcccaacaatatgcaacaaaat
gttgattttaatgggaagcagaggggaaaaaagaccaaacaccctggtgatagcttggta
aagccaatgtgggatttatcacaacttgagcctatccagaaagacttttacaagccacat
gctaatgtagagggtcgctcagatgaagaagtgcaaaaattcagagtttcaaaggaaata
actgtcagtggcaacaatgttccccgccctaatcaagtctttgatgaaggaaatttccct
gatcacataattagtacgatcaaggaacaagggtatgctgagccaacaggtatccaggct
cagggatggccaattgccctgtctggtcgtgatatggtaggcatagcatccactggttcg
ggtaaaactcttgcatacatgttacccgctgctgttcatatcagccatcaacagcgtatt
cagcgaggggatggccctattgcgcttattctggctcctaccagggaattggctcagcaa
attcaatctgttgctcagagttatagtgctcgtggcactattagaaacacttgtctgttt
ggaggctcacctaagggaccacaagcaagggacttggaaagaggtgtagagatagtgatt
gcaacacctggacgattgatcgatttcttggaacgcggcacaactaacttgcgtcgctgc
acttacttagttttggatgaagccgatagaatgttggacatgggtttcgaaccacaaatc
cggaagatcattgaacagattcgcccagatcgtcaagttctcatgtggtccgctacatgg
cctaaagaaattcaagctcttgctgaagacttccttaatgattatgtaaaagtaaatatt
ggttcattgaatctgtctgccaacaataatattaaacaaataattgaagtttgcgaagag
cacgaaaaagagattaaattgactaacttactgaaagagatttcccaagagagagataac
aaggtcatagtttttgtggaaactaagaaaaaggtggatgatattgctcgtgctgtacgt
cgcaggggccacaatgctcttgctatacacggtgacaagtcgcaaattgagcgcgatgca
gtgttgaccgaattcaggaatggagtcaatagcatcctgattgccacggacgttgcagcc
cgcggtctcgatgtcgaagacgtcaaatttgtcataaactttgattacccaaattcgtct
gaggattacattcatagaattggtcgaactgggcgttgtcaacaatctggaacagcttat
acctacttcacaactggagatgctcgtcaggctcgcggcttacttgctgtcctacgagaa
actggccagaatccaccaacaaaattaaacgatatggctcgcagcaacaacaacaactct
ggtcgtaaccgttggcaacaacgcaaagaaaataacagtggtgccagctcgccgcgtcaa
caaaataaccagtggaataacaaaatggccaacacaaatcctgaagaaagccagaacact
taccaaaaccgtggcggtaatcctcaagctcctcgattctcaaaccaaaaccaaggaaat
caaggataccggcaaaataactatcaaaagcaggtgcccttccctagccccaatgttttt
gaatctatgggcaattaccagggtggatacaataatggatatcaaaatggatacaatgga
caaaacggatatggtcaacgcccatacaataatatgcgcaatggtgggcagcagtatcgc
aacaataatgctggcaacaagaacaatggcactggctcatcttatggatctcctcctcca
cactttgctaccccacagcattaccctcagatgcatcctcatcatcaggagatgctaggc
ggcaaattttacggcggcggtgttggtggcggtggaccctgcggttaccaagctgcagtg
ggtgtaagcgggccttacgcacacctgcctcctggctccctgctttacgcggctccagtg
cagcagtaa
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