Helicoverpa armigera (cotton bollworm): 110370101
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Entry
110370101 CDS
T05609
Name
(RefSeq) ATP-dependent RNA helicase P62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110370101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haw03041
]
110370101
03009 Ribosome biogenesis [BR:
haw03009
]
110370101
Enzymes [BR:
haw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110370101
Spliceosome [BR:
haw03041
]
Complex A
U1 snRNP components
U1 related factors
110370101
Complex B
110370101
Ribosome biogenesis [BR:
haw03009
]
Eukaryotic type
Pre-60S particles
Helicases
110370101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
110370101
NCBI-ProteinID:
XP_021181507
LinkDB
All DBs
Position
11:complement(join(5786080..5786265,5786516..5786694,5787667..5787905,5788085..5789158,5789718..5789719))
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AA seq
559 aa
AA seq
DB search
MSSSWNNSRGGSGGSKFGGERKFGSSNGSSRFSNGGSKFGGSGGGGGNRFGGSGGGFGGG
GGKKDFTGGQNMRRPNWDTMSLQPFNKDFYNPHPTVLNRSPYEVEEYRSKFEITVSGLDI
PNPIQNFDEANFPDYVNQSITNMGYKDPTPIQAQGWPIAMSGKNLVGIAQTGSGKTLAYI
LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASDFGNSAYVRNTCVFGGAPKRE
QGRDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI
RPDRQTLMWSATWPKEVRKLAEDYLGDYLQINIGSLQLSANHNILQIVDVCQEHEKENKL
NVLLQEIGQSQEPGAKTIIFVETKRKVENITRNIRRYGWPAVCMHGDKTQQERDETLYQF
KQGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP
SNSRQAKDLVSVLQEANQVVNPQLQTMADRCGGGGGGWNRNRYGGGRGGGGSFKRGSNFG
RGNGGGSNGGAGHKRFNDY
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtagttggaacaatagccgtggtggaagcggtggttccaaatttggcggagaa
aggaagttcgggagcagcaacggctcatcacgattcagtaatggaggatcaaagttcggc
ggtagcggaggcggcggtggcaacagatttggtggttctggcggcggttttggcggcggc
ggtggcaagaaagacttcactggcggtcaaaacatgcgccggcccaactgggatactatg
tctctgcaaccattcaacaaagatttctacaacccacacccaacagttctaaacagatca
ccctatgaggtagaggaatacagaagcaaatttgagatcactgtaagtgggctggatatc
ccaaaccccattcagaattttgatgaagccaatttccctgattatgtcaatcaaagcata
accaacatgggatacaaggacccaacacctatccaagcacaaggctggcctattgctatg
tctggaaagaacttggtaggcattgcccagactggctcaggaaaaactctggcttacatt
ttacctgctattgtgcatatcaacaaccagccccctattaggcggggtgatggtcccatt
gctttggttcttgcaccaactcgtgaattagcacaacaaatccaacaagttgcttctgac
tttggtaactctgcctatgtccgcaacacttgtgtatttggtggtgcacccaagagagag
caaggccgtgacttagaacggggagtagaaattgtaattgctactcctggtagattgatt
gatttcttagaaaagggtaccacaaatttgcagagatgcacatatttggtcctagatgaa
gctgaccgtatgttggacatgggttttgaaccccaaattagaaaaatcattgaacagatt
cgccctgatagacaaactttgatgtggtcagcaacatggccgaaggaagtaagaaaatta
gctgaagactacctgggagattacctccaaattaacattggatctctacagttatcagct
aaccacaacatcttacaaattgtagatgtttgccaggaacatgaaaaagaaaacaaatta
aatgtacttttacaagaaataggacagagtcaagagcctggtgccaaaacaattatcttt
gtagaaactaagaggaaagtagaaaatatcactaggaatataagacgatatggatggcct
gcagtttgtatgcacggtgacaaaactcaacaggagagagatgaaacactatatcaattt
aagcaaggccgtgccagtatacttgttgcaactgatgttgcagccagaggacttgatgtt
gatggaataaaatacgttattaactttgattatcctaactcatctgaggattacattcac
cggattggcagaacaggacgttcaaaatcaaaaggcacatcttacgccttctttacaccc
tccaactctcgtcaagccaaagacctggtgtcagttctacaagaagctaatcaggtggtg
aaccctcaactccaaaccatggccgaccgctgcggcggtggcggcggaggctggaacaga
aacagatacgggggtggccgcggaggcggcggttccttcaaacgtggaagcaacttcggt
aggggaaatggtggcggcagcaacggtggtgcaggccacaagagatttaatgactattaa
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