KEGG   Helicoverpa armigera (cotton bollworm): 110371453
Entry
110371453         CDS       T05609                                 
Name
(RefSeq) RNA polymerase-associated protein Rtf1 isoform X1
  KO
K15178  RNA polymerase-associated protein RTF1
Organism
haw  Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:haw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haw03021]
    110371453
Transcription machinery [BR:haw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     110371453
SSDB
Motif
Pfam: Plus-3
Other DBs
NCBI-GeneID: 110371453
NCBI-ProteinID: XP_063898553
LinkDB
Position
28:join(6542599..6542667,6544206..6544335,6545466..6545681,6546459..6546522,6546921..6547040,6547852..6548012,6550128..6550226,6551060..6551247,6553737..6553872,6554656..6554782,6556359..6556464,6557192..6557323,6557607..6557735,6558583..6558695,6559211..6559379,6559848..6559943,6560259..6560354,6560905..6561019,6561598..6561704)
AA seq 790 aa
MAKRKNKPLIDSDSSSECSDLDSQFLNLAKKKKKTGDSPPQSKSKRSGSGSDSESDWDDD
DNKKNNSKSSSSSGSDSESDARSDTSKKKEPARTSRKTSSEHSDDNRKKPEPKKTETRRS
TDSAGSGKKKETYSEPEEGEVSSHSSDNDSIDSEEEFDDGYDENLMGDEEDRARLAAMSE
KEREQEIFKRIERRDLMKTRWEIERKLRLARRSAAERSASPGEIQRRREARRRRRALREQ
RQRERERDRQEKREAEAERPEPKEPEKEKEQTPPSPGEILDDPKDADPSERSASPLFGAK
TERKRNVDDKRQNAMAALRAQRDAKASRVELTRQKRRQEEETKDKDDDDANDYVSPQDAD
AEIIGGTSKQSVKLKASDIYSDDSGSDSDDNKSQGRRSSSSSSSSDGEQEEKKREREEVE
IKYADTKEQINKLRLSRFKLERLVHLPFFARVVNGCFVRIGIGNNNGNPVYRVAEIIDVY
ETAKVYNLGNTRTNKGLKLRHGTQDRVFRLEFVSNQEFTESEFQKWNKAIKDANKKPPTM
DFVRNKIQEVKEALMYEFKEEDIEKIVAEKDRFRSHPTNYAMKKTQLMKERDVAQLRGDD
ETVMELNAKIQELEERASQLDKTRTSSIQSISYINNRNRKLNVETAEKAIMEEVKANKGK
KTDDPFTRRHTKPVMNFKSGGSKTQDVIRSEEEIAEMLKQREEEEKAAKEQKERERLQQQ
QDLEKAKRDKPAGNDTSLYSLHDFDINIELDLPIAKSVSSQPKQVTTKVKETGPKRSLNL
EEYKKRHGLI
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggctaaaaggaagaataaaccgctgatagactcggactccagcagcgagtgttcagat
ttagactcacaattcctcaatttagcaaagaaaaagaagaaaaccggtgattcaccaccg
cagtcaaaatccaagagatctggttccggatctgacagtgaatccgactgggatgatgat
gataataagaaaaataattcaaagtcatcgtcatcatcaggatcagattctgaaagcgat
gccagaagtgacacgtcaaagaaaaaggaaccagctcggactagtaggaagacatcgtca
gagcattccgatgataaccggaaaaaaccagaacctaaaaagacagaaactagaagaagt
actgatagtgctggctcaggaaaaaagaaagagacttatagtgaaccggaggaaggtgaa
gtatcatcacattcgtcagacaatgattccattgattccgaagaggaatttgatgatggc
tacgatgaaaacctcatgggagatgaagaggatagggctcgcctcgccgccatgtctgag
aaggagagagaacaagagatcttcaagagaatcgagaggagagaccttatgaagaccaga
tgggagatagaacgcaagctccgcctagctcgtcgctctgcggcggagcggtccgcgtcg
cccggagagatacagcggcggcgcgaggcgcggcgcaggagacgagcgctgcgggaacag
cgccagcgggagagagagagggaccgccaggagaagagagaggctgaagctgaaaggccg
gagcccaaagaacctgagaaagagaaagagcagacacctccaagtcctggtgagatactc
gacgaccccaaggatgcagacccatcagaacgttccgcctcccccctattcggggcaaag
acagaacgcaaacgtaacgtggatgacaaacgtcagaacgcaatggcggctctcagagct
caacgcgacgctaaagccagtcgagtcgaacttacccgacagaagcgaaggcaggaggaa
gaaactaaggataaggatgatgatgatgcgaacgactacgtttctcctcaggacgcggac
gccgaaattatcggaggtactagcaagcagagcgtcaaactgaaagcttctgacatctat
tctgacgactctggctcggattctgacgataataagtcgcaaggtcggcgcagttcgtca
agttcttcctcgtcagacggagaacaagaggagaagaagcgagagagagaagaagtggag
atcaaatacgctgacactaaggaacagatcaataaacttagacttagcaggtttaaactg
gaacgtttggtacatcttccattcttcgctcgcgtcgtcaacggctgcttcgtaagaatt
ggcatcggcaataataacggaaatcctgtttatagggtagcagaaataatagacgtatat
gaaacggctaaagtatacaatttaggtaacactagaacgaataagggacttaagttaagg
cacggcacacaagacagagtgttccggttagagtttgttagtaatcaggaattcacagag
agtgagtttcagaaatggaacaaagcgatcaaagatgcgaataagaagcctcccactatg
gacttcgttagaaataagatacaagaggttaaagaggcacttatgtatgaatttaaggaa
gaggatatagagaagatagtagctgaaaaggatcgattcagatcacatcccacaaactat
gctatgaagaaaactcaacttatgaaggaaagggatgtcgcgcaattgagaggagatgac
gaaacagtgatggaattgaacgcgaaaatacaagagttagaagaacgagcgagtcagttg
gacaaaactagaacttcatctatacagagtatatcttatattaacaatagaaataggaaa
cttaatgttgaaactgccgaaaaggctatcatggaagaggtaaaagcgaataaaggcaaa
aaaacagacgatcctttcacgaggcgacatactaaacctgtcatgaatttcaagtctgga
gggagcaaaactcaggatgttataaggagtgaagaggaaatagcggaaatgttaaaacag
agagaagaagaagagaaagcagctaaagaacagaaagaaagagaaagacttcaacaacag
caagacttggagaaggcgaaacgcgacaagccggcgggtaacgacacaagtttgtactcg
ctacacgacttcgatattaacatcgagctcgacctgcctatagccaaatcagtatcaagc
cagcccaaacaggtgacgacgaaagtgaaagaaaccggcccgaaacgttcacttaattta
gaagaatacaagaaacgccacgggctcatatga

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