Helicoverpa armigera (cotton bollworm): 110372319
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Entry
110372319 CDS
T05609
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110372319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haw03400
]
110372319
DNA repair and recombination proteins [BR:
haw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110372319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
VHS
Motif
Other DBs
NCBI-GeneID:
110372319
NCBI-ProteinID:
XP_021184609
LinkDB
All DBs
Position
10:complement(join(6494196..6494387,6494473..6494627,6494797..6494965,6495100..6495325,6495423..6495664,6495766..6496046,6496197..6497936,6498085..6498367,6499707..6499822,6500809..6501178))
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AA seq
1257 aa
AA seq
DB search
MPTTRKKVIKTVYKDEESEAEGGDFSDSGSDAKISADGESSSDEDAEDDEFDKKNKKSKA
KKTKIIVVKPKFTKSLLRQIKKQERRSTNAGKEEDADIPSSHFCVKDLKDAEKLLPILNL
SESDSSDNESPNASNRTTSTSEPSAEVSQDSSNDNEGMQCQYVWSNNIQENSEEIAQKAF
LELEKHKAKIEETKASLEKYTLKVNSEKESDVKDLLAMGEEVLPEEPEEKIVTKKPKVRK
RKDDSDSEIEDWEEVKESKEIPQQGIQLFVEFPDAASRKERKKMDVEMMMKRKINRVKKE
YQVYMHKVHVLCWLGHGNYVSGVLNDQELMAAVLTLVPSKECYPGERVDMKYVEQITTWY
KDKLSLKQDKHEDKFKPKAPPLKTLLLEQIKSRVVSAKKYLVFIFVIMLRALGLQCRVMF
NFVVLPLKPPSSELCSLATKPKKEKADKPNSTEQPKSPSVKNEDKKDEKDKEKAGPSKPK
AKKQKIAQVDGNDDSFLYSDDENIMQVDGSDDTVNARKARANKRAKAANPNTEKSDNEDV
SPAKVAKTRAGRVAPSKQDTKKVEEKVTSKKLSLKGKNTKEAIVEKGNAVDKPPIESKPQ
KVNTKTALVVKPVKKQAIKNTGEAIVEKDNAKVKTPVKSVTRGQKLKAENIVNSLENKEK
SPGKKSTNTRSRLQRNNKTTNANTDKDIIVPKISVTNENAEDVASKYFEETKPAAKTSRL
SRKRSQTTNPDPSKTASKVDDKSKGKVAAKGRTKSAPGAATEKSKYFEGQTSKESTPKRA
SRQIKKEIKEEDSQRVSHRDLVKPSKGKGDVTKDLVNIIKGRVKDAKLESKKGLVKGKIK
KESDEDSDYLPVEEPIRRNSESDDDFKPTKISPKPSTSRRIDRRVLSSVSSEDTKKNRTD
VWCEIFVEELEQWISVDVIKGKVHSSGDLYSHATHPVCYIVGWDNNNYLKDLTRRYVPHW
NTVTRKVRAETPWWNKAITPWLGPKTARDKEEDEYLDRMQLEAPLPKSIAEYKNHPLYVL
KRHLLKFEALYPPDAAVLGFVRNEPVYARECVYTLHSRDIWLKEAKVVKLGEKPYKIVKA
RPKWDRLSNKLITDKPLEIFGPWQVQDYEPPTAENGIVPRNAYGNVELFKECMLPKKTVH
IKLPGLNRVAKKLNIDCAPAMTGFDFNGGWTHPVYDGFVVCEEFEEIITEAWVKDQEEQE
RKELEKIETRVYGNWKRLIKGLLIRERLKNKYGFEDPSTSETTKKSKGPRLVVKKKS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgccgactacaagaaagaaagtgattaaaacagtatacaaagatgaagaaagcgaagct
gagggtggtgatttcagtgattcgggatcagacgcgaagatttctgcagatggtgaatct
agctccgacgaagatgctgaagacgacgaattcgataaaaagaacaaaaaatctaaggct
aaaaaaactaagatcattgttgtgaaacccaagtttacgaaaagcttattgagacaaata
aaaaaacaagaacgtcgatcgacgaacgccggcaaggaagaagacgccgacattccctct
tcacatttttgtgtaaaagatctgaaagatgcagagaaattgctaccaattcttaatttg
tcagaaagtgattccagtgacaatgaatctcctaacgcttctaatagaaccactagtacc
tcagaaccatctgcagaggttagccaagattcaagcaatgacaatgaaggcatgcagtgt
caatatgtatggtcaaataacatccaagaaaacagtgaagaaattgcacagaaagctttt
ttggagcttgaaaagcacaaggcaaaaattgaagagactaaagcttcacttgagaagtat
accttgaaggtaaactcagaaaaggaatctgacgtgaaggaccttcttgcaatgggagaa
gaagttttacctgaggaacctgaagaaaaaattgtaacaaagaaaccaaaggttagaaaa
cgtaaagatgacagcgattctgaaatagaggattgggaagaagttaaagaatcaaaagaa
atacctcagcaaggcatacaactttttgtcgagttccctgatgctgcgagcaggaaagag
cgaaaaaaaatggacgttgaaatgatgatgaaaaggaaaataaatcgcgttaaaaaagaa
tatcaagtttacatgcataaggtacatgttttatgttggttaggccacggaaattatgtg
agcggtgttttaaatgaccaggagctcatggcagcagtattaactttagtcccatcgaaa
gagtgctatcctggagagagagtcgatatgaaatatgttgaacaaatcacaacttggtac
aaagacaaactatcacttaaacaagacaaacatgaagataaattcaaaccaaaagcccca
cctctcaaaactttattattagaacaaattaaaagtagagttgtatcggcaaaaaaatat
ttagttttcatatttgttatcatgctacgagcattgggactacaatgtcgtgtaatgttt
aattttgttgtactgcccctaaaaccaccgagttctgaactgtgttctcttgctacaaag
ccaaaaaaagaaaaggctgataagcccaatagcactgagcagcctaagtctccatccgta
aaaaatgaggataagaaagatgaaaaagataaggaaaaagctggtccatcaaagcccaaa
gccaaaaagcaaaaaattgctcaagtagatggaaatgacgacagctttctttatagtgat
gatgaaaatataatgcaagttgacggtagtgatgataccgtgaatgctagaaaagctaga
gctaacaaacgagcaaaagcagctaacccgaatacagaaaagtctgacaatgaagatgta
tcaccagcaaaagtagctaaaactcgagcaggtcgcgttgcaccttcaaaacaggataca
aaaaaagttgaagaaaaagttacttcaaaaaaattatcactgaaagggaaaaatactaaa
gaagcgattgtagagaaaggtaatgcggttgataaaccacctattgaaagcaagcctcag
aaagtaaatactaaaacagctttagtagtaaaacctgttaaaaaacaggcaataaagaat
actggagaagcaatcgttgaaaaagataatgcaaaagttaaaacacctgtcaaaagcgta
actcgcggacaaaaactaaaagctgaaaatattgtcaattcattagaaaacaaagaaaaa
agtcctggaaagaaatcaactaacaccagaagtaggttgcaaagaaataacaaaactaca
aatgctaacactgataaagacattattgttcctaaaatatctgtaactaatgagaatgca
gaggatgtggcaagtaaatactttgaagagacaaaaccggcagcaaaaactagtcgttta
tcaagaaaacgttcacaaaccactaatcctgatccttccaaaactgcaagtaaagttgat
gataaaagtaagggaaaagttgcagctaaaggccgaacaaagagcgctcctggtgcagct
acggaaaaaagcaaatatttcgaaggacaaacgtctaaagaaagtactcctaaaagagct
tcaagacaaataaaaaaagaaattaaagaagaagatagccaaagagtcagccatagggat
cttgtaaaaccttcgaaaggaaaaggtgatgttactaaggatttggtaaatatcatcaaa
ggccgggtcaaagatgcaaaattggaatcaaagaaaggattggttaaaggtaaaatcaag
aaagaatctgatgaagacagtgattatttaccagtagaagaacccatacgacgtaactct
gaaagtgatgatgatttcaagcccaccaaaattagtcccaagccgagcacaagtcgccgc
atagaccgtcgtgtcctatcatcagtctccagcgaagataccaagaagaaccgaactgac
gtgtggtgcgaaatatttgttgaagaactagaacagtggatctctgttgatgtcatcaaa
gggaaagttcactcttctggtgacctatatagtcatgccacacatcctgtgtgctacata
gttggctgggacaacaacaactacttaaaggatttgacacgtagatacgtaccccattgg
aacacagtaactcgtaaggttcgcgctgaaactccttggtggaacaaggcgatcacaccc
tggcttggaccaaagacagcaagagataaggaagaggatgaatacctggatagaatgcag
ttagaagcgccgttgccaaagagtattgctgaatacaaaaaccatccgttatacgtgtta
aagcggcacttacttaagttcgaagctctgtacccgcctgatgctgctgtgctcgggttt
gttcgcaacgaaccagtgtatgcgcgggagtgcgtatacacgctccactccagagacata
tggctcaaggaagctaaagttgtgaaactgggagaaaaaccgtataaaatcgttaaagca
cgtcctaaatgggataggctttcaaataaactgataactgataaacctctggaaatattt
ggaccatggcaagtacaagattacgaaccaccaactgcagaaaacggcatagtacctcgc
aacgcttatggcaatgttgaactgttcaaagaatgcatgctgcctaagaagactgttcat
ataaagttgcctggcttgaacagagtagccaagaaactgaacatagattgtgcgcccgcg
atgaccgggttcgatttcaacggtggatggacccaccctgtatacgacggattcgtagtt
tgcgaagaatttgaggaaatcattactgaggcgtgggtaaaggatcaagaagaacaagaa
cgcaaagaattagaaaaaatcgaaacaagggtttatggtaactggaagagattgattaag
ggcttgttgattcgtgaacgtctaaagaataaatacgggtttgaggacccaagcacgtca
gaaactacaaaaaaatctaaaggaccaagattggttgtgaagaaaaaatcatga
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