Helicoverpa armigera (cotton bollworm): 110372887
Help
Entry
110372887 CDS
T05609
Name
(RefSeq) uncharacterized protein LOC110372887
KO
K12597
protein AIR1/2
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110372887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110372887
03016 Transfer RNA biogenesis [BR:
haw03016
]
110372887
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
110372887
Transfer RNA biogenesis [BR:
haw03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
110372887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAD11
Motif
Other DBs
NCBI-GeneID:
110372887
NCBI-ProteinID:
XP_049692323
LinkDB
All DBs
Position
3:join(11997621..11997629,11997721..11999218,12000264..12000330,12000666..12000789,12002153..12002290,12002715..12004316)
Genome browser
AA seq
1145 aa
AA seq
DB search
MEEELNEHDLEERLYAMLHHVDETEGNLTASHSDGLNIVESAPRSTVRRYWRTSEPTSPY
QKVNVQKEPAAPSLNSNKPDNNITQTNQTPKPKEEKRDSPSKLPAVDLSIFQSPVPQNIK
KTIEIIEQDEDRTVLLDSSDEDEVIEVALPPKPTITIESSDEDELHIINPVSPTKPQVNV
EKTTTSAGRDVTASPAPSGVSSVSDEFMRGDCIALNISSRHQDNPSFDFSLHGSDLLVQS
TPSKKKKKKKTKEAVTSTPVVAATPEKATPNDECFATPKSKAKNKKQKTKLYAVTEKSIP
SADVYDSDSNQSIDTNKNRNSYIVTDKSFPSTDVYESDSNLSECAKEAPKRAQNNDIESS
DSSVSLDKVSEPPSKVSKRNESSHANETETTIVDLTENESFVNLDESDIQENIVMGNVSG
FTEYEDYGDENVPDNNISKFGSTNIPSILNENLDFDNLKGKDKVCKRRRYSLTTLRAEME
KFYNESWGGENFNHREIQKSMSRDKSLWVIDPKDRMPPLAKRKVTCNYCNRAGHRDDTCR
LKPAVCYMCGSTGHYEPRCPRKICVNCGSPNQMYSTMCRNCCNWGSVRCGECGQAGHPHT
HCPDLWRRYHNTIDMTSTLERCNQNKKHQQLYCSGCTRRGHLVHTCRVTLPFSGLPINSP
YVCIYRPLYQPNADKQTGQQNSPPPTTPLRIERNKRQSKSPTAHETHVNKKRNLSTCEDS
ERRNTKSPGPQRKTSISKEAEESNKNQAKTTQENKTQAGQEKAPNFIPICSANHDKKGNI
IQDNEVSDTSDIVTSARIYITNDVIEKLKSDEGKAWLKEITEKHSVEVENAEINSFLSIK
GKLGDQEAFHAELRDWYKPADSAKPSNDGDTKTENKCDNAWSALPKNRNSLLKQLDKALN
SLKQDIGDPNALYKELTYLQNRHQQLLKQKVISPKTLHNNRGNINQMLKKLNMVLIGQAG
LADGSAHLNELYSFQEKLMNLRQKTISNDLRKEIGQHYSLIFSALPRDDYSDLLKMYHNN
VKQPSMMKKQKKKLKLNPKLNRLKIKVNSIPTQSIQNGIKEKREKREEGSVACSDPHMIQ
KLAFYHKRLVSSRPAGAALKKTRGELVRRLHSSIASLYRKEKMSSKNKKKVKKLQEQAQL
FLSNV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaacttaacgagcatgatttggaggaaagactgtatgctatgctacatcat
gtggacgagacggagggtaacttaacagcgagccacagcgatgggttgaacattgtggag
agcgcgcccagaagcaccgtgcggcgctactggcgcaccagcgaacccacttctccgtat
caaaaggtgaacgtacagaaggaacccgccgcgccatcactcaacagcaacaagcctgac
aacaacattacccaaactaaccaaacaccaaagcccaaagaagaaaaacgtgattctcct
agcaaacttcccgctgtcgatctatctattttccagtctcctgtaccacaaaatattaag
aaaactattgaaattattgaacaggatgaagacagaactgttttacttgattctagtgat
gaggatgaggtaatagaagtggcactgcctcccaaacctaccattactattgagagctct
gatgaagatgaactgcacattattaaccctgtatctccaactaagccacaagttaatgtg
gaaaaaacaacaactagtgcaggacgagatgttaccgccagtcccgcaccctcaggggta
tcttcagtttctgatgaattcatgcgtggtgattgtatagctttgaatatatcttcccga
caccaagacaatcccagctttgatttcagtctgcatggatctgaccttcttgttcaaagt
actccttcaaaaaaaaagaaaaagaagaaaaccaaggaagcagtgacctctacaccagtt
gttgctgctacccccgagaaggctacacccaacgatgaatgttttgctacacctaaaagt
aaagccaagaataaaaagcagaaaactaaattgtatgcagttaccgagaaaagtattcct
agtgccgatgtgtatgactctgacagcaaccagtctattgacacaaataagaaccgaaac
tcatacatagttacagataaaagttttcccagcactgatgtttacgaatctgattcaaat
ctgtctgaatgcgcaaaggaggcaccaaagagggcacagaataatgacatagagagttca
gacagcagcgtgtccctggataaagtgagtgaaccaccttctaaagtctcgaaaagaaat
gaatctagccatgctaacgagaccgaaaccacaattgttgacctgacagagaatgaaagt
tttgtgaatcttgacgaatctgacatccaggaaaacattgttatgggtaatgtgtccgga
ttcactgagtatgaggactacggagatgaaaacgtgcccgacaacaatatttctaagttt
ggctcaacgaacataccttcgatattgaacgagaaccttgacttcgacaacttgaaaggc
aaagacaaggtttgtaaaaggcgaagatactctctgacaactcttcgtgctgaaatggaa
aaattctacaatgagagctggggcggagagaactttaaccacagggagatacagaaaagc
atgtcacgtgataagagcctgtgggtgattgatcctaaggatagaatgccgccgctagcc
aaaagaaaagtcacgtgcaactactgcaaccgtgcgggccaccgcgatgacacgtgtcgc
ctcaagccggccgtctgctacatgtgcggctccaccgggcactacgagccgcgctgtccc
aggaagatctgtgtcaattgcggctcgcccaaccagatgtactcgacgatgtgccgcaac
tgctgcaactggggctccgtgcgctgcggcgagtgcggccaggccggacacccccacacg
cactgccccgacctctggcgccggtatcataacactattgacatgacctcaacactagaa
cgctgcaaccaaaacaagaagcatcaacaactgtactgcagcggctgcactcggcgtggc
catcttgtgcacacgtgtcgcgtcaccctgcccttctccggcctgcccatcaactcgccc
tacgtctgcatctaccgacctctgtaccagcccaacgcagacaaacaaacaggacagcaa
aacagccccccaccaaccacacctctcagaatcgaacgcaataaacgccagtccaagtca
cctacagctcacgaaactcatgtcaataagaaaagaaatctctccacctgcgaggatagt
gaacgacgtaacactaaaagcccaggaccgcaacgaaaaacttctatcagtaaagaagct
gaagaaagcaataaaaatcaagctaaaactacgcaggagaataaaacacaggctggacaa
gaaaaagcacctaacttcatccccatctgctcagcaaaccatgacaaaaagggtaacatt
atacaagataatgaagtatctgatacaagtgatattgtcacttctgccaggatttacatc
accaacgatgttattgagaaactcaaatctgatgagggcaaggcctggctgaaagaaatc
acagagaaacacagtgttgaagtggaaaacgcagaaataaactcgtttttgagtattaag
ggcaagcttggagatcaagaggctttccatgcggaactaagagattggtacaagccagct
gacagtgcaaaaccaagcaacgatggcgataccaaaaccgaaaacaaatgcgataatgct
tggagcgccctgcctaaaaatagaaacagtttgttgaaacaactcgacaaagctctcaac
tcattgaaacaggacataggagaccccaacgcgctctacaaggagttgacatacctgcag
aatcgtcaccaacaactgcttaaacagaaagttattagtcctaagacattacataacaac
cgcggaaacattaatcaaatgctcaagaagctaaacatggtacttatcggacaggctgga
cttgccgacgggtccgcacacctcaatgaactgtactccttccaggagaaactcatgaat
ttgcgacagaaaactatatccaatgacttacgaaaggagatcggacaacattactcgctt
atattctccgcgctccccagagacgactactcagacttactgaagatgtaccacaacaat
gtgaaacaaccctcaatgatgaaaaagcagaagaagaagttgaaactcaaccctaaactg
aacagattgaagataaaagtaaacagcattccaacacaatcaatacaaaacggcattaag
gagaaacgcgagaagcgagaggagggttctgtggcctgcagcgatccgcacatgatacag
aagctggcgttctaccacaagcggctcgtcagctcgcggccggccggcgccgcgctcaag
aagacgcgcggcgagctcgtgcggaggctgcactcctccatcgcctcactatacaggaaa
gagaaaatgtcttctaaaaacaagaagaaggtcaaaaagctgcaagaacaggcgcagttg
ttcttgtctaatgtataa
DBGET
integrated database retrieval system
