KEGG   Helicoverpa armigera (cotton bollworm): 110373385
Entry
110373385         CDS       T05609                                 
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X3
  KO
K13217  pre-mRNA-processing factor 39
Organism
haw  Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:haw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:haw03041]
    110373385
Spliceosome [BR:haw03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    110373385
SSDB
Motif
Pfam: HAT_PRP39_N HAT_PRP39_C Suf TPR_14 HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C NRDE-2 Mononeg_mRNAcap
Other DBs
NCBI-GeneID: 110373385
NCBI-ProteinID: XP_063895735
LinkDB
Position
20:complement(join(6160607..6160829,6161156..6161354,6161722..6161990,6162414..6162634,6162983..6163147,6163449..6163559,6163830..6163977,6165422..6165569,6166086..6166212,6166995..6167120,6167330..6167488,6167706..6167852,6168103..6168243,6168393..6168458,6168534..6168614,6169151..6169377,6169588..6169729,6169811..6169840))
AA seq 909 aa
MEDETSSDLQKCLSDGPMDTDEGPLINENSNGLSHLLTEGEFNSVEAAVDESSASNQESQ
KATVDTDFEVSELSDAGYSLPADDMTQTKTDDSADNVAEVKAQATAEPDLEQAEDSSSAP
AIKTDQPNIEMDEQSVPVTEAPVEPIQEMEESEATSQLQVPEKNDEETKIKEDNATPTKK
SKMGGAEETEVVSEDELPEVQKPSIKDAENVSDDELPGPKPAELPADTEVVSEDELPASK
KETKESRKRKTEDERDGYDPGSPTSENESSNKKQAVAKNGESKPVPSEKRSSIDEKPKKK
LPELDKYWKVVNDDPTDFTGWTYLLQYVDQESDVEAAREAYDAFLSHYPYCYGYWRKYAD
YEKRKGSKKKCLEVLERGLKAIPLSVDLWIHFLNHIKTTRTEDHAYIRSQYERAIEACGL
EFRSDRLWESYIKWEAENGSALNVTNIYDRLLATPTLGYTSHFDNFQEHVMSEPVAGVVS
RAELVRLRGEVRDAAGAAPQLDLPPGEDEPLDHVASEEEAQAIKERIIAARRKVHKTTGE
QVAARWTFEEGIKRPYFHVKPLERCQLKNWKSYLEWEKQHGSLKRALVLHERCLIACALY
EEFWMRLIKFLEERIESNPELVAVEREVLERACSVHHLDKPELHLHWAHFEEAHGNQAKA
ADILDRIEKTCPNLVQIQYRRVNLERRRGDYDKCVQLYEGYIAAAKSKAVASALAIKFAR
FLFHVRAQPAAARAALDAAVLRDPLNARLHAQRLDLALHTPGTPYEELDELVSSYGKQEG
AEPEACAMLAWRRRELAEELGSAAAARDAHAHARALAKHLRKRARKDKHDPPPPPTSTCA
DSNKKKECAAAPANSAASPGGGSYYQAPAAAQSYEQPYAQPYQPAWGYQQAPGPYQHHPH
PWPQYPNYY
NT seq 2730 nt   +upstreamnt  +downstreamnt
atggaagacgagacgagttcagatttgcagaagtgtttatccgatggaccgatggatacg
gacgaaggtcctcttattaatgagaactcaaatggattgtcgcatttgttgacggagggc
gagttcaacagtgtcgaggcggcggtggacgagtcgtcagcatcgaatcaagaaagtcag
aaggcgacggtggatactgattttgaagtcagtgagctgtctgatgctggctattcattg
ccagctgatgacatgacacaaacaaaaacagatgacagcgctgacaatgttgctgaggtg
aaggcgcaagcgacagcagagcctgacttagaacaagctgaggactctagtagtgctcca
gctatcaaaactgatcaaccaaacatagaaatggatgagcagtctgtaccagtgacggag
gcaccagttgagcccatacaggaaatggaagaatctgaggctacaagccaactacaagtt
cctgaaaaaaatgatgaggaaactaaaattaaagaggataatgctacaccaactaaaaaa
tccaagatgggtggtgcagaagagacagaagttgtgtcagaagatgaattacctgaggtt
cagaagccaagtataaaggatgcagagaatgtgtccgatgacgagctgccgggacctaag
cctgctgagcttcctgctgacacagaggttgtatctgaagatgaattgccagcttctaag
aaggagacgaaagagtcccgtaaacgtaagactgaagatgagcgcgatggctatgatcct
ggatcacccacatctgagaatgaatcctctaacaagaaacaggctgttgcaaagaatgga
gaaagcaagccagtgccttctgaaaagagatcctcaattgatgaaaaaccaaagaagaaa
ttgcctgaacttgacaaatactggaaagtcgtcaatgatgacccaactgattttactgga
tggacgtacttgctacaatatgttgatcaagagagcgacgtggaagcggctcgcgaagcg
tacgacgcttttctgtcgcactacccgtattgttacggctactggaggaaatacgccgac
tacgagaaacgtaaaggaagtaaaaagaagtgcctcgaagtgttggaaagaggactcaaa
gccatcccactgtcggtggatctgtggatacatttcctaaatcatataaagacgacgagg
actgaggaccacgcttacattcgctcgcaatatgagagggccatagaggcgtgtggtcta
gagttccgttcagatcgtctttgggaatcttacatcaagtgggaagctgagaacggatcg
gctcttaacgtcaccaatatttatgatcgacttttggcaacccccacccttggatatact
tcacatttcgacaatttccaagagcacgtgatgtcggagccggtggcgggcgtggtgtcc
cgcgcggagctggtgcggctgcgcggcgaggtgcgggacgccgccggcgccgcgccgcag
ctcgacctgccgcccggggaggatgagccgcttgatcatgttgcatcggaggaagaggca
caagctatcaaagagcgcatcatagccgctcggcgcaaagtacacaaaactaccggagaa
caagtcgcagccaggtggacgtttgaagaaggaatcaaacggccgtacttccacgtgaag
cctttagagcggtgccagctgaagaactggaagtcgtacctggagtgggagaagcagcac
ggctccctcaagcgggcgctggtgctgcacgagcgctgcctcatagcctgtgctctttat
gaagagttctggatgaggctgataaaattcctagaagagcgcatagagagcaaccccgag
ctggtcgccgtcgagcgcgaggtgttagagcgagcatgctccgtgcaccacctcgacaag
cccgagctgcacctgcactgggcgcacttcgaggaggcgcacggcaaccaggccaaggct
gctgacatactcgaccgcatcgagaagacctgccctaatctagtgcagatacagtaccgc
cgcgtaaacctagaacgtcgtcgaggcgactacgacaaatgcgtgcaactatacgagggc
tacatcgcggccgccaagagcaaggcggtggcctcagctctggccatcaagttcgcgcgc
ttcctgttccacgtgcgcgcgcagcccgccgccgcccgcgccgcgctcgacgccgccgtg
ctgcgcgacccgctcaacgccaggctgcatgctcagcgcctcgacctcgcgctgcatacg
ccagggacgccttatgaggagctcgatgagctggtgtcgtcatacggcaagcaggagggc
gcggagcccgaggcttgcgcgatgctggcgtggcggcgccgcgagctggcggaggagctg
ggcagcgcggcggccgctcgcgacgctcacgcgcatgcgcgggcgctcgccaagcatctg
cgcaagcgagcccgcaaggacaagcacgacccgccgccgccgcctactagcacatgcgcc
gactcaaacaagaagaaagagtgcgcagctgctcccgccaacagcgcggcgtcgccaggc
ggcggcagctactaccaggcgccggcggcggcgcagtcctacgagcagccgtacgcgcag
ccctaccagcccgcctggggctaccagcaggcgcccggcccctaccagcaccacccgcac
ccctggccgcagtatcccaactactattag

DBGET integrated database retrieval system