Helicoverpa armigera (cotton bollworm): 110373611
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Entry
110373611 CDS
T05609
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03022
Basal transcription factors
haw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110373611
09124 Replication and repair
03420 Nucleotide excision repair
110373611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haw03021
]
110373611
03400 DNA repair and recombination proteins [BR:
haw03400
]
110373611
Transcription machinery [BR:
haw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110373611
DNA repair and recombination proteins [BR:
haw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110373611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
110373611
NCBI-ProteinID:
XP_063896195
LinkDB
All DBs
Position
21:complement(join(6566497..6566560,6566830..6566866,6567821..6567956,6568387..6568515,6568909..6569025,6569478..6569574,6569759..6569857,6570180..6570360,6570713..6570728))
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AA seq
291 aa
AA seq
DB search
MADDDGPSDSSLLVIIVDTNPNQRYITEDPKVLTNCLDAVIAFANSHLMQKSRNELAVIG
CHFHKSEYLYPSPGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQDDKPGESLLAG
AVAMALCFIAKIRREAPPGLRLTSRILIVTGSSDTAAQYINYMNVFFTAQKQQVLIDVCS
LDKHLSLLQQGCDITGGLYLKVPSLEGLLQYLLWVFLPESSERTKLVLPGRGRVDYRAAC
FCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVFKIGGPLPIKPKKKKMKV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatgatggtccctcagatagtagccttttagttataatagtggacacaaat
ccaaaccagaggtatattacggaggacccaaaagtgctgactaactgcctagatgctgtc
atagcgtttgccaactctcatctcatgcagaagtcgaggaatgaactggccgttatcgga
tgccattttcataagagtgaatacctgtatccatctcctggcaaacctttggatgttaga
caaatagatggccagtatgagctgtttacattagttgagaaaactattaaaatgagattg
gtaaatctaataaagagtcagccacaggatgataagccgggagaatcactgctggccggt
gcagtcgctatggctctctgctttatagctaagattcgtcgtgaagcgccgcccggcctg
cgtctgacaagtcgtatattaatagtgacgggtagcagtgacacggccgctcagtacatc
aactatatgaatgttttcttcactgcacagaaacagcaagtactaatagatgtgtgctcg
ctagacaagcacttaagtttgttacaacaaggctgtgacatcaccggaggcctgtatctc
aaagtaccctcacttgaaggactgctccagtatttattgtgggtgtttctcccggagtct
tcagagcgtacaaagctggtgctacccggtcgtggccgcgtggactaccgcgccgcatgc
ttctgtcacagagaactgctcactataggatatgtgtgctctgtgtgtctcagtgtgttc
tgcaagttcagtcctatttgtacaacttgtcatacggtgttcaagattggcggtccatta
cccattaaaccgaagaagaagaaaatgaaggtttag
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integrated database retrieval system
