Helicoverpa armigera (cotton bollworm): 110373640
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Entry
110373640 CDS
T05609
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03013
Nucleocytoplasmic transport
haw03015
mRNA surveillance pathway
haw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110373640
09122 Translation
03013 Nucleocytoplasmic transport
110373640
03015 mRNA surveillance pathway
110373640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110373640
03041 Spliceosome [BR:
haw03041
]
110373640
Enzymes [BR:
haw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110373640
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110373640
Spliceosome [BR:
haw03041
]
Complex C
Other components
EJC/TREX
110373640
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110373640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110373640
NCBI-ProteinID:
XP_021186643
LinkDB
All DBs
Position
22:complement(9249007..9250284)
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AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQTADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMAGVRVSVFFGGMPVQKDEEVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKEFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaacgacgatcttctggactacgaagacgaggagcaggcagatcagcagacc
gctgacggggcgaccgaagcggcgccaaagaaagaggttaagggatcctatgtatctatc
cacagctcaggctttagagatttcttgttaaagcccgagatattgcgcgccatcgtcgat
tgcggtttcgagcatccttcggaagtacaacatgaatgtattccgcaagctgtccttgga
atggatatcttgtgtcaagcgaagtcgggtatgggaaaaaccgccgtttttgtgctggcg
acactacagcagctagagccatcggaaaaccatgtctacgtcctcgttatgtgccacacg
agagagttagctttccagatcagcaaggaatacgaacgattctccaaatacatggccggc
gtcagggtttcggtgttcttcggtggtatgccggtacagaaagacgaagaggtcctcaaa
acggcgtgccctcacatcgtcgtcggtacgcctggcaggattttggcgttagtaaacagt
aagaaactgaatctgaaacatttgaagcactttatacttgacgaatgtgacaagatgctc
gaatctctggacatgagacgcgacgtgcaggagatattcaggaacacgccgcacggcaag
caagtcatgatgttctccgctacactgagcaaagagatcagaccggtgtgcaaaaagttc
atgcaggatcctatggaggtgtacgtggacgatgaagccaagctgaccctgcacgggttg
cagcagcattatgttaagcttaaggaaaatgagaaaaacaagaagctgtttgaactactt
gacgttctggagttcaaccaagtagtcatatttgtcaagtcagtgcagcgctgcatagcc
ttagcacagttgttaacagaccagaacttccctgctattggaatccacaggaacatgact
caagatgagcgtctctctcgctaccagcagttcaaggagttccagaagagaatcctggtt
gccaccaacttgtttggtagaggaatggatattgagcgagtgaacattgtgttcaactat
gacatgcctgaagactcagatacgtacctgcatcgtgtggctcgtgccggaagatttggt
actaaaggcttagcgataaccatggtgtcagacgagaatgatgccaagatcctcaatgaa
gtgcaagaccgcttcgatgtcaacattacggagttgcccgaagagattgagctatcaact
tatatagaaggacgataa
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