| Entry |
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| Name |
(RefSeq) general transcription factor IIH subunit 1
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| KO |
| K03141 | transcription initiation factor TFIIH subunit 1 |
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| Organism |
haw Helicoverpa armigera (cotton bollworm)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:haw00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110373735
09124 Replication and repair
03420 Nucleotide excision repair
110373735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:haw03021]
110373735
03400 DNA repair and recombination proteins [BR:haw03400]
110373735
Transcription machinery [BR:haw03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110373735
DNA repair and recombination proteins [BR:haw03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110373735
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
23:complement(join(8100045..8100167,8100607..8100797,8101910..8102036,8103525..8103623,8103898..8104143,8104335..8104469,8106335..8106440,8106763..8106964,8107329..8107465,8109236..8109437,8110975..8111128))
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| AA seq |
573 aa
MTTSSEDVLLSVSYVRYKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGTCSTFHFVNPAGAEAQAKDRDQVKMLLQNLLPKFKRQIDGELEMKSRL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKTYTESNNIKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKMDDQAIASAMKHTTLDLTVDLPQFTENIPLLPTEDDAPPEKDRGDNTSIHR
NMIKRFNQHSIMVLKASHKTNSSNNNNNSSSKTTNNNKVVENGVKESNGVAEKRTADSNT
EAPDKKKRILEKIHYEDLEDRKGNEDTQELKLSKVERYLLGPSSQTHQTHTHTNNPPPLS
ALASICQAWSSGQQCQRPVRVSAGACVGALGELSPGGALMRHHHAASMAQLIPPDVKSEL
HRIYLSGGELLRELWRCFPQPGAATDTEDTTARAEKFYEALLRFRNVKLRPFEEKMLRDL
TPLATTLTRHMNQMIDTACAKYAVWQQRQAKLR |
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| NT seq |
1722 nt +upstreamnt +downstreamnt
atgactacgtcttctgaggacgttttgctcagcgtgagctacgtgaggtacaagaagggt
gatgggactttgtatgttatgaaccaaaggttagcttggatgttggaaaacagagacaca
gtcgctgtatcacataaatatgctgatattaagacacaaaaaatatccccagcaggcaaa
ccaaaggtgcagctgcaagtggtgttacacgatggtacgtgttccacattccacttcgtc
aatcctgctggggcggaggcccaggccaaagaccgggatcaggttaaaatgttgctgcag
aacttactaccaaagtttaagagacaaatcgatggggagctcgaaatgaagtctagattg
ttatccctacaccctactttaaagcatttatatgaagacttggtgatatcgaaggtgatc
aatagtgaagagtactggaatacgcccacactcaaaacttataccgaatctaataatatt
aagcaggaggctggtgtatccggagcatttttagcggatatccagccacaaacggacggc
tgtaacggcctcaaatataacctcacgcaagatataatagacgccatatttaaaacttat
cccgctgtcagaaagaaacacattgattatgtacccaacaagatgactgaagctgagttt
tggaccaagttttttcagtctcattattttcatagagaccgtatcgcctcatcgtctagc
aaagatttgttcggagaatgtgccaaaatggatgaccaagccattgcatcagctatgaaa
cacactactttagatctcactgtggacctaccacaattcacggaaaacatacctctttta
ccgacggaagacgacgcgccgccagagaaggacagaggggataacacctccatacacagg
aacatgatcaagcggttcaaccaacactctattatggtgctcaaagctagtcataaaaca
aattctagtaataataataataacagtagtagtaaaacgacgaataacaacaaagttgtt
gagaatggcgtcaaggaatcgaatggagtagcagagaagagaacggcagatagtaataca
gaagctcctgataagaagaagagaatattagagaagatacattatgaagatctagaagat
agaaaggggaatgaggatacgcaggaattgaaattgtcaaaggtggaacgatatcttctt
ggtccatcgtctcagacacatcaaacacacacgcatacaaataatccaccacctttatct
gcgctcgcgtcgatatgtcaagcgtggtcgagcgggcagcaatgccagcggccggtgcgg
gtgagcgcgggtgcctgcgtgggtgctctgggcgagctcagccccggcggcgccctcatg
cgccaccaccacgccgcctccatggcacaattaataccacccgacgtgaaatccgaactc
catcgcatctacctctccggtggggagttgctacgggaactatggcggtgtttcccgcag
cccggggcggcgaccgacacggaagataccacggccagagcagagaagttttatgaagcc
ctgttaagatttaggaatgttaagttgaggccttttgaggaaaaaatgctccgagattta
acacctttagccacaacgttaacacgacatatgaatcaaatgatagacactgcctgcgcg
aaatacgcggtttggcaacaacgccaggccaaactgcggtag |
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