KEGG   Helicoverpa armigera (cotton bollworm): 110374072
Entry
110374072         CDS       T05609                                 
Name
(RefSeq) negative elongation factor D isoform X1
  KO
K15181  negative elongation factor C/D
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110374072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haw03021]
    110374072
Transcription machinery [BR:haw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     110374072
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 110374072
NCBI-ProteinID: XP_049692226
EnsemblRapid: LOC110374072
LinkDB
Position
3:join(6897163..6897222,6897634..6897859,6897951..6898060,6898138..6898245,6898540..6898689,6899044..6899174,6899342..6899529,6899888..6900128,6900346..6900556,6900633..6900773,6901312..6901599)
AA seq 617 aa
MPSQYEEERTWEAPNHAQYEEEGNEDVIENPEEVLHECLEKFKTPDYIMEPGIFGQLKRY
FQAGGNPEQVIEQLSINYNAVAQMANLLAEWLILGGVKVTEVQAMVENHLKDMILKTFDP
KKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEIT
SISTAAQQIEVFSRVLKSAIVGFLQSSDDWQNSVNECAKMVCHGAHTYVYSQVIVHILSQ
EPRGGAIMKRLGQEITRCAQQSGHDVTPITLALTSGESWRNARTALAAMLSRGALNPADI
SVLFRAYTQPEPPPVHLLRIPQFLELLVDALFKLGSKLNPEHKSKYMYLLAYAASVCEGL
TAGRPVKDELKATVQAIEKVHAVCTSSASSSELIAELPTLYHCIRFPVVGMGVLVWVECV
VTEPSYFKLCTEHCPVHLALLDEVASCHQLLHHRLLRLLVQLFESPQDELEILVQLELKK
MLLDRMVNLLSRGCVVPVLRYIKQCWQRGDTDISLIRYFITEVLDAIAPPYTPEFVQLVL
PMVENEEITGTMRAEGENDPVSEFIGKKKYINIPMLFNFKFIYLFLINVLFSSSLQGALC
CGIIKYYLPIQYLLFIC
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgcccagtcaatacgaagaggagcgtacttgggaagcaccaaatcacgctcaatatgag
gaggaaggaaatgaagatgtcattgagaaccctgaagaagttttacatgaatgccttgaa
aaatttaaaactcctgactatatcatggaaccaggaatttttggtcaactgaagcgatac
tttcaagctggaggcaatcctgaacaagtgattgagcagttgtctataaactacaatgca
gttgcacaaatggcaaatctgttagcggagtggcttatacttggaggagtaaaggttact
gaagttcaggcaatggttgaaaatcatttaaaggatatgatcctaaaaacttttgatccc
aaaaaagctgacacaatattcaccgaagaaggagaaactcctgcttggttgacagaaatg
atagaacatcccacttggcggtccttaatttatagattggctgaagagtatccagattgt
cttatgctaaactttactattaagttgatatcagatgctggctttcaaggagaaattaca
agcatatcaacagcagctcagcaaattgaagtattttcaagggtgcttaaatctgcaatt
gttggcttcttgcaaagctcagatgactggcaaaatagtgttaatgaatgtgctaaaatg
gtctgccatggtgcacacacatatgtgtatagtcaagttatcgtgcatatactttctcaa
gagcctagaggaggagcaatcatgaaaagacttggacaagaaataactagatgtgcacaa
caaagcggacatgatgtcactccaatcactctggctctcacatcaggtgaatcatggcgc
aatgctcgcacagcactggcagccatgttgtcacgcggcgcactcaacccagctgatatt
tctgtattattcagagcttacacacagcctgagccaccaccagttcatctactaagaatt
ccacaatttttagagctgctagtcgacgccttattcaagttaggtagtaaactgaatcct
gaacataagtcaaaatacatgtatttgctggcgtatgctgcgagcgtttgcgaggggctc
actgccggcaggcctgttaaagatgaactaaaagctacagtgcaagcaattgaaaaagtg
cacgccgtgtgtaccagttccgccagctctagtgaattaatagcagaattaccaacgttg
tatcactgtataaggtttcctgtcgttggcatgggagtcctagtttgggtagaatgtgtt
gttacagaaccttcttacttcaagttgtgcacagaacattgtcccgtgcacctggcactc
ttggatgaagttgcatcctgtcatcaattactgcatcatcgcctcctgagattactcgtt
cagctattcgaatctccacaagatgagttggaaattttagtgcagttggaattaaagaaa
atgttacttgatagaatggttaatttactaagccgaggatgtgtcgtccctgtccttcgt
tacataaaacaatgctggcagcgcggggacactgatatttcattaattagatacttcatt
accgaggttctagatgccatagctccaccatacacgccagaatttgtccagttagtgttg
ccaatggtggagaatgaggaaattactggaacaatgagagctgaaggggaaaatgatcca
gtttctgaattcataggtaaaaaaaagtacataaatataccaatgctgttcaactttaag
ttcatttatttatttttaattaacgttttattttccagttcactgcaaggcgcactatgt
tgtggtataattaaatattatctgcccatccagtacctgctttttatttgctaa

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