Helicoverpa armigera (cotton bollworm): 110374475
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Entry
110374475 CDS
T05609
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110374475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haw03009
]
110374475
Enzymes [BR:
haw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
110374475
Ribosome biogenesis [BR:
haw03009
]
Eukaryotic type
90S particles
Other 90S particles
110374475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
110374475
NCBI-ProteinID:
XP_049698486
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All DBs
Position
5:complement(join(9450745..9451067,9451201..9451444,9451532..9451675))
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AA seq
236 aa
AA seq
DB search
MGKKRKLGAKDDEFEFDPIPRHLVTSHIKKQEKRLIVILENAQLETVKTGNSFELLNCDD
HANILRKNDRDPGSCRPDITHQSLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPR
TFKRFAGLMVQLLHKFAIRASDGPMKLLKVIKNPVTSHLPVGVRKVTMSFSSKVVKNCRE
LVPKDEPIVMVIGAMAHGKVEVDYSEDIISISNYPLSAALTCAKLCTAFEEVWDVA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaaaggaaacttggggcgaaagatgatgaatttgaattcgatccgatacca
agacatttagtgacttcgcacattaaaaaacaagaaaaacgtctcattgttattttggaa
aacgcacagcttgagacagtaaagaccggcaacagtttcgagttattgaactgtgatgat
catgcaaacatactaagaaagaatgatcgagaccctggctcctgcagacctgatatcact
caccagtcattactgatgttgatggactctcctctgaacagagctggtttgctgcaagtt
tatatccacacagagaagaatgttctcatagaaatcaacccacaaactagaatacctcgc
acatttaaacgatttgcaggtttaatggttcaacttcttcacaaatttgcaataagagct
tcggatggcccaatgaaattattgaaagttataaaaaatccagtgacatcacatttaccc
gttggtgtaagaaaagtgacaatgtctttcagttcaaaagttgtgaagaattgtagagag
ttagtacctaaggatgagcccatagtcatggttattggtgccatggctcatggcaaagta
gaagtagattattctgaagatattatatctatcagcaactatccattgtcagctgccttg
acttgtgctaaattgtgtaccgcctttgaggaagtttgggatgttgcataa
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