Helicoverpa armigera (cotton bollworm): 110374693
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Entry
110374693 CDS
T05609
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03022
Basal transcription factors
haw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110374693
09124 Replication and repair
03420 Nucleotide excision repair
110374693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haw03021
]
110374693
03400 DNA repair and recombination proteins [BR:
haw03400
]
110374693
Transcription machinery [BR:
haw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110374693
DNA repair and recombination proteins [BR:
haw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110374693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
110374693
NCBI-ProteinID:
XP_063891839
LinkDB
All DBs
Position
8:join(8234364..8234425,8234553..8234754,8235020..8235159,8235406..8235568,8235814..8235912,8236653..8236828,8237289..8237420,8237563..8237671,8237931..8238062)
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AA seq
404 aa
AA seq
DB search
MADDEQDSKEYRWETGYEKTWEAIKEDEDGLVEGLVAEFAQKAARKAVVARRGPVRLGMM
RHVLVAVDCSEAMNSQDLKPSRFLCTLKLLEKFIEEYFDQNPLSQLGLVLMKNKRAEKLT
ELSGNVRKHIKSLQGLTDMALSGEPSLQNTLEFAGRVLKPLPGHASRELLVLFASLTTCD
PGDITTTIQSLKMEGIRCSVIGLAAEVRICKKLCQDTGGEYGVVLDDVHYRSLLLDYTSP
PPRARALDAGLVKMGFPHSAPPVNQTDPGTNADPPITVCMCHLEDGEGVGGEGHLCPQCR
SKYCSLPAQCRTCGLTLASAPHLARSYHHLFPVEPYEELANEGQAQYCFACLRNFTDLDK
QIYRCTRCHECYCWECESVVSTTLHVCPGCSSRPHLYQRLPDAS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatgaacaagattctaaagaataccggtgggagacaggttatgagaagact
tgggaggccattaaagaagatgaggacggtttggtggaaggtctggtggcagagtttgca
cagaaagcggctcgcaaggctgtggtggcccgccgcggacccgtgagactgggcatgatg
aggcatgtgctagtcgctgtagattgttccgaggctatgaactctcaagacttgaagcca
tctagatttctatgcacacttaagctgcttgaaaaattcattgaagagtattttgatcag
aatcctctgagtcaacttggtttggtactgatgaaaaacaaaagagctgagaaactaaca
gagttatctgggaatgtcagaaagcatatcaagtctttacaagggttgacagacatggca
ttaagcggggagccctcactacaaaacactctggagtttgccgggcgagtcctcaaacct
ctacctggtcatgcctccagggaactgttggtgctatttgcttcactcactacttgtgac
cctggagatattactactaccattcagtccctcaaaatggaagggattcgttgttcagtt
attggtctggcagctgaagtgaggatctgtaaaaagttatgtcaagatactggtggagaa
tatggtgtggtgttagacgatgttcactaccgctcactgctgctagactacacaagcccg
ccgccccgcgcccgcgcactggacgccggcctcgtgaagatgggcttccctcactccgcg
ccgccggtcaaccagacagacccggggactaatgccgacccacctatcactgtgtgcatg
tgtcacttagaggacggcgagggtgtcggcggggagggacacctgtgtccgcagtgtcgc
agcaagtactgttccttgccggcgcagtgtcggacttgcggtctcacactggcctccgca
ccgcatttagccaggtcgtatcatcatttattccctgtggaaccgtacgaagaattggca
aatgagggacaggcgcaatactgttttgcgtgtctaagaaacttcacagatctagacaaa
cagatataccgttgcacaagatgtcacgagtgctattgttgggaatgcgagagtgtggtg
tccacgactctgcatgtttgtcccggctgttcgtcccgaccacatctgtaccagagacta
ccagatgcgtcgtga
DBGET
integrated database retrieval system
