KEGG   Helicoverpa armigera (cotton bollworm): 110375378
Entry
110375378         CDS       T05609                                 
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110375378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haw03019]
    110375378
   03012 Translation factors [BR:haw03012]
    110375378
Enzymes [BR:haw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110375378
Messenger RNA biogenesis [BR:haw03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     110375378
Translation factors [BR:haw03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    110375378
SSDB
Motif
Pfam: Helicase_C HA2_N DEAD OB_NTP_bind nSTAND3 HA2_C AAA_19 ResIII AAA_11 RsgA_GTPase AAA_22 ABC_tran NB-ARC PhoH MeaB Cas3-like_C_2
Other DBs
NCBI-GeneID: 110375378
NCBI-ProteinID: XP_049705764
LinkDB
Position
18:join(4636415..4636467,4637560..4637967,4638590..4638761,4638973..4639647,4639920..4640089,4640497..4640659,4640967..4641243,4641414..4641876,4642470..4642700,4643057..4643235,4643550..4643877,4644075..4644349,4644568..4644745,4645118..4645235)
AA seq 1229 aa
MFETVTYHSSDSGSSDLWSNTFNLSMDEMNGIGLNPLSFGMHPLSAGINPNEFPVNIKME
PHENFYIKQEPYQHFQIKQEPPDEFHQWTPNPWNNQLKMECDMGNLVPIKQEIPHKFQIK
QELGNPVSLKLEVAENKPIRRTQSVTSTYTEASRISVVQSIRMSRRGNWNRAFYKNNNYR
GRPQGLRGKNIGLYYRDLQMKKNKNKDQDFMINFAIPPGILNSLQKNIESIKKIAKECNI
NIQPPRRMNLVKIKQEQPSEYECANQVDNFAVNNFMKLHRETSSFERPGTSFSSNVVEPM
NQESETVRAIIKAEPTNETEVAQSSHSSDIRMSALQGAGDYKYGYADIITGTFEEKLEQC
ISKGIIITMENSATQTLNTTFYENYKNMINSKTYKKMKVFREILPTYKKSKELLEVINNN
QVVVISGETGCGKSTQIPQIILDDAIVNNRGSKVHILVTQPRRIAASSLAMRVAEERSER
VGESIGYAVRLETVEPRPRGSIKFCTTGILLAELEVNQGLTNYSHVILDEVHERDCHIDI
SMLMLKQVLKKRKDLKLILMSATIDAEKLQSYFDDCPMMHIEGLAYPVQDIYLEDILSLI
KYIPPVNQGNNQNVKIWQRQKMKRQEAEMQRDIQYKAEIAPWLESIRKNISRDVYVALQD
SKIEDLNIDLIYELLVYICKDAPGAVLIFLPGIGDITKLLKKINTSNFFPKSLYDIYPLH
SKLPSLEQHKIFQRPPENVRKIILATNIAETSITIDDIVYVIDCGKIKYSGLNIEDNIPT
LQTEWVSQANLRQRRGRAGRCQPGVCYHLVTSFRASKLAERLLPEIQRNSLAEPVLAIKR
LRLGKAVDAMSMMPSPPAVTTTERAVKHLFQIGALNSEEKLTPLGWHLARLPVHPAAGKL
LLLGTIFGCLNRAASVAAVWGFKDPFQLVIGKEKEVDEAKRTLALGEPSDHVAISEAIIQ
FEQCRSYQEKRNFAYENFLAFNTLELLCDMKKQFGDNLKQMGFLQRADVTSDWENRNMNN
MSLFKAIIAASLYPNIATVGWRQSHGRNPQSQPRLKVRTSEDGPIAIHPSSVMAYKMHGG
QRFPMQPACITPGANWLVYWLKQRSSDLFLIDVTLIYTLPFLFFGELVVSEAPDPSDYCV
MISNVKVNCKKTTMDLLWQMRSLLDQVLASKIGDSSKQATLRNPFENQVFDAVMELITAE
DERAEYIADDDDSESDTSEFYSSRYSWRR
NT seq 3690 nt   +upstreamnt  +downstreamnt
atgttcgagacggtcacttatcacagctctgacagtgggtcttcggatttatggtcaaac
actttcaatttatcaatggatgaaatgaatggaattggactaaatcccttatcgtttgga
atgcatcccttatcagctggaataaatccaaacgagtttccagtgaacataaaaatggaa
cctcatgaaaacttttatataaaacaggaaccctaccaacattttcaaataaaacaggaa
cctcctgatgaatttcatcaatggacgccaaacccctggaataatcaattaaaaatggaa
tgtgatatgggtaatttggttccgataaaacaagaaattccccataagtttcaaataaaa
caagaactaggaaatccagtgtctttaaaattggaagttgccgaaaataaaccaattcga
cgtacgcaatcggttacctcaacctacacagaagcttctagaatatcagtagtgcagtca
atcaggatgtctcgtcgtgggaattggaatagagcgttttacaaaaataacaattacagg
ggcagaccacaaggtttgcgcggtaaaaatattggcctttattacagagacctgcaaatg
aaaaaaaataaaaacaaggatcaagacttcatgatcaattttgctattcctcctggaata
ttaaatagcttacagaaaaacatagaatccattaaaaaaattgccaaagagtgcaatatc
aacatacagccaccaaggcgcatgaacttggttaaaataaaacaagaacagccatctgaa
tatgaatgtgcaaatcaagttgataatttcgctgtgaataactttatgaagttacataga
gaaacaagttcttttgagagaccaggcacttcattcagcagtaatgttgtggaaccaatg
aaccaagagtcggagactgtcagagctattattaaagctgaaccaacaaatgaaactgag
gtagcacaatctagtcattccagtgatatacgaatgagtgctctgcaaggagcaggagat
tacaagtatggttacgcagacattatcactggaacatttgaagaaaaacttgaacaatgt
atctcaaagggtattattataaccatggaaaattctgccacccaaactttgaacacaacc
ttctatgaaaactacaaaaatatgataaactctaaaacttacaaaaagatgaaggtgttc
agagaaatattgccaacttacaaaaagtcgaaggaattattagaggtgataaataacaat
caagtggttgtaattagtggtgagactggatgtggaaagtctacacagattccacagata
attttagatgatgcaatcgtcaataaccgaggttctaaagtccatatactagtcacacag
ccgcgacgtattgcagcctcttctttggcaatgagagttgctgaagaaagatctgaacgt
gttggtgaatccataggatatgctgtaagattggagactgtggagcctaggccgcgcggt
agcattaagttttgtacgacgggtattttactagctgagctggaagtcaatcagggtttg
actaactatagtcatgtgatacttgatgaggtgcacgaaagagactgccatattgacata
tctatgttgatgttgaaacaggtgctcaaaaaacgcaaagatctcaaacttattcttatg
agtgctacaatagatgctgaaaagctgcagtcttattttgacgactgtccaatgatgcac
attgaaggattagcttatcctgtacaagatatttatctagaagatattctaagcttaatt
aagtatatcccacctgtaaaccagggtaataaccaaaatgttaagatatggcaaaggcag
aaaatgaagagacaagaagctgaaatgcaaagggatatacagtataaagctgaaattgct
ccatggctcgaatctataagaaagaatataagtcgagatgtttatgtagcacttcaagat
agcaaaattgaggatttgaacatcgatctcatttacgaactgttagtctatatttgtaaa
gacgcgcccggcgctgtgctcatattcctgccaggaataggcgatataacgaaattgttg
aagaaaattaatacgagtaatttcttccccaagtccctttatgatatctatcctcttcat
tctaagttgccatctttggaacaacacaaaatattccagcgtccgccagaaaatgtgagg
aagataatcctagcaacaaatatagctgaaacatctataactatagatgatattgtatat
gttattgattgtggaaaaataaagtacagtggacttaatatagaagacaatatccctact
ttacaaactgagtgggtttctcaagcgaatttgcgacagcgtcgtggtcgcgccggccgt
tgccagcctggggtatgttaccacctcgtaacgtcattccgcgccagcaagctagcagag
cgcctcctacctgaaatacagaggaactcgctagctgaacccgtgctcgctatcaaacga
ctgcgcttgggcaaggctgtggatgctatgagtatgatgccctcgccacctgctgttact
acaaccgagagggctgttaagcatttgtttcagattggagcacttaacagtgaagaaaaa
ctaacccctctaggctggcacttagcgcgactacccgtgcaccccgccgccggcaagctg
ttgctgttaggaactatattcgggtgtctcaaccgcgcggccagtgtggcggccgtgtgg
ggctttaaggaccccttccaacttgttattggcaaagaaaaagaagtagatgaagccaaa
cgcactctcgctctcggcgagccaagtgaccacgtggctatatccgaagccatcatacaa
ttcgagcaatgccgctcctaccaagaaaaacgcaactttgcctacgaaaacttcctagca
ttcaacactctagaacttctatgtgacatgaagaaacagtttggcgataatctgaagcag
atgggatttttgcaaagggctgatgttacatccgattgggagaataggaatatgaataac
atgagcctcttcaaagctatcattgccgcttctttgtatcctaatattgctactgtagga
tggcgacaatctcacgggcgcaatccgcaatcccagcctagactgaaagttcgtacatct
gaagatgggcccatagccatacacccaagtagtgtgatggcgtacaaaatgcacgggggt
caaaggttcccgatgcaaccggcttgcatcacgccaggagccaattggctggtctactgg
ctcaagcagaggtcatctgacctcttcctcattgatgtcaccctgatatacacgctaccg
ttcctgtttttcggtgaattggtggtttctgaagcaccggacccatcagactactgcgtt
atgatatcgaatgtcaaagttaactgcaagaaaaccactatggatcttctgtggcaaatg
cggtctttattagaccaagttttagcttccaaaattggtgactcaagcaaacaagccacg
cttagaaatccctttgaaaatcaagtatttgatgctgtcatggagttaataactgctgaa
gatgaacgcgccgagtatatcgccgatgatgatgattcagaatccgatacttccgaattt
tactccagcagatattcttggcgacgttga

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