KEGG   Helicoverpa armigera (cotton bollworm): 110375587
Entry
110375587         CDS       T05609                                 
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110375587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haw03021]
    110375587
   03019 Messenger RNA biogenesis [BR:haw03019]
    110375587
Transcription machinery [BR:haw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     110375587
Messenger RNA biogenesis [BR:haw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110375587
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCHC zf-CCCH_4 zf-CCCH_3 zf-CCHC_2 zf-CCCH_10 Nab2-like_zf-CCCH_ zf-CCHC_3
Other DBs
NCBI-GeneID: 110375587
NCBI-ProteinID: XP_021189422
LinkDB
Position
11:complement(join(11445225..11445473,11445856..11446096,11446182..11446458,11446547..11446649))
AA seq 289 aa
MEVIVANVDHIKFDIDYALEEQYGALPLPFPGMDKSTAAVCEFFSQPGGCGNGPQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLSGFCPDGSSCKYMHPRFELPAPPEQTK
DAKRLPVCHYCSEAGHKASSCNKIPAEQREAAQRQEEARYRALGYVKPAENDDNNAQRLQ
RIVHKPLEEVTCFKCGTKGHYANKCPKGHLAFLSSQSNQNNMNTFKKPN
NT seq 870 nt   +upstreamnt  +downstreamnt
atggaagtcatagttgctaatgtcgaccatattaaatttgatatagattatgctttggaa
gaacagtatggggcactaccgttaccattcccaggaatggacaagtcgaccgcagcagta
tgtgaatttttcagccagcccggaggttgtggcaatggccctcaatgtccgtacagacac
gtccgaggggatcgcacggtggtctgcaagcattggctcagagggctttgcaagaaaggc
gaccagtgcgagttccttcacgagtacgacatgtccaagatgcctgaatgttacttctat
gccagattcaatgcatgccacaacaaagaatgtccattccttcacatagatcctgaaagt
aaaattaaggattgcccatggtatgaccgaggtttctgccggcacggtcctcactgccga
caccggcacgtgcggcgagtgctctgcatgaactacttgtctggcttctgtcctgatggc
tcctcctgcaagtacatgcatcctcggtttgagcttcccgcccctcccgaacaaacgaag
gatgccaagagactacccgtgtgtcattactgctctgaggctggacacaaagcttcatct
tgcaataaaataccagctgagcaaagagaagctgcccagagacaggaagaggccagatat
cgcgcccttggctacgtcaaaccagcggaaaatgacgacaacaatgctcaaagactgcag
aggattgtccacaaacctcttgaagaggtcacatgcttcaaatgtggcactaaaggacat
tatgccaacaagtgccccaagggacatctcgctttcctgtctagccagtccaaccagaac
aatatgaacacattcaaaaaacccaactag

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