Helicoverpa armigera (cotton bollworm): 110376439
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Entry
110376439 CDS
T05609
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03013
Nucleocytoplasmic transport
haw03015
mRNA surveillance pathway
haw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110376439
09122 Translation
03013 Nucleocytoplasmic transport
110376439
03015 mRNA surveillance pathway
110376439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110376439
03041 Spliceosome [BR:
haw03041
]
110376439
03009 Ribosome biogenesis [BR:
haw03009
]
110376439
03012 Translation factors [BR:
haw03012
]
110376439
Enzymes [BR:
haw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110376439
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110376439
mRNA cycle factors
Stress granule specific factors
110376439
Spliceosome [BR:
haw03041
]
Complex C
Other components
EJC/TREX
110376439
Ribosome biogenesis [BR:
haw03009
]
Eukaryotic type
90S particles
Helicases
110376439
Translation factors [BR:
haw03012
]
Eukaryotic type
Initiation factors
eIF-4
110376439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
UvrD-helicase
TniB
AAA_30
Utp25_C
Motif
Other DBs
NCBI-GeneID:
110376439
NCBI-ProteinID:
XP_021190583
LinkDB
All DBs
Position
20:complement(join(7925603..7925855,7926023..7926277,7926404..7926626,7926886..7927221,7927311..7927461))
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AA seq
405 aa
AA seq
DB search
MTASEVSYNRKIISEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ
RSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSS
MHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtctgaagtttcctataatcggaaaataatatcggaagatttgtcgaatgtt
gaattcgacacaagtgaagatgttgaagttatcccaactttcgattctatgggattgcgg
gacgagttactgcgaggaatttacacctatggtttcgagaagccgtccgcaattcaacaa
agaagtatattgccgattgttaaaggccgagatgtgatagctcaagctcagtctggtacc
ggaaaaaccgcgacattttcaatttccatcctgcagtctctggatactacgttacgtgag
actcaggttctcgtgttgtcgcctacccgtgagttggccactcagatccaaaaggttatc
ctcgcgttgggcgacttcatgaatgtccagtgccatgcttgtattggtggcaccaacctc
ggtgaggacatcaggaagctggattacggacaacatgttgtgtcaggaacacccggaaga
gtgtttgacatgattcggagacgtgtattaagaacaagatccatcaaaatgctggtactt
gatgaagctgatgagatgttgaataagggcttcaaagagcagatctacgatgtctaccgt
tacctgcccccggccacacaagttgtgctcatttctgctacactgccccatgaaatcctg
gaaatgacttccaaattcatgactgatcctattaggattttggtaaagcgtgacgaattg
acactggaaggcatcaagcagttcttcgtagcagtagaacgtgaggaatggaagtttgac
acactctgtgatctctatgatacgctgaccatcacccaggcagtgattttctgcaacact
aagagaaaggttgactggctgacacagaagatgcaagaagctaactttacagtgagctca
atgcatggagatatgcctcagaaggagagagacaatattatgaaggagttccgttctgga
caaagccgtgtcctcatcacaaccgacgtgtgggcgagaggcatagatgtccagcaagtg
tcactagtcatcaactacgacttgcccaacaatcgtgagttgtacatccacaggatcggt
aggtccggtcggttcggacgcaaaggtgtcgccatcaacttcgtcaaatcagatgacatc
aggatcctgagagacattgaacagtactactctacccaaattgatgagatgcccatgaat
gttgcagatttaatataa
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