Helicoverpa armigera (cotton bollworm): 110376462
Help
Entry
110376462 CDS
T05609
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03008
Ribosome biogenesis in eukaryotes
haw03013
Nucleocytoplasmic transport
haw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110376462
03015 mRNA surveillance pathway
110376462
03008 Ribosome biogenesis in eukaryotes
110376462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110376462
03009 Ribosome biogenesis [BR:
haw03009
]
110376462
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110376462
mRNA cycle factors
Stress granule specific factors
110376462
Ribosome biogenesis [BR:
haw03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110376462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_4
LRR_8
LRR_9
UBA_8
Motif
Other DBs
NCBI-GeneID:
110376462
NCBI-ProteinID:
XP_021190616
LinkDB
All DBs
Position
16:complement(join(8423353..8423452,8423981..8424141,8424669..8424833,8425307..8425475,8425869..8426116,8428681..8428717,8430755..8430864,8431226..8431416,8431900..8432499,8432667..8432718))
Genome browser
AA seq
610 aa
AA seq
DB search
MPKNGGRIRNFKNNDAFEHDDRTHTSNTRRVSFKPNTHKGKNKWNNVKLQLDDDVYMGGT
GEGGPHVHRKGAFRGRGGRLNSPSPRTGHGMAKKKFIAGVLPWYQIIIPYGAKHEKDVIL
KTLLSYISPDIFVPHYYKTNGNAAVFYVDDVKLAEKLFHADRKITMSDGFKLMVIVRNSV
PNVAVDAEMKEKMKLAMAKRYNATTKALDLTKFHADPDLADIFCALFRPVIMLAAIDIIA
ENIPDLEALNLNDNKLHGIEHLKILSSKLKNLKILYMGDNRIPFLGSLEPLKNLQLVELY
LKGNPLVNRFSDNEIYVSDVRKKFPKLVKLDGVELPPAIGFDVLEDVSLPLRQQSFLVDP
AGQDLVREFLTQYFAIYDAESRQPLLEAYHEHATMSLAATYLSNDNRNAATQRLNSYITN
SRNILRITERESRRRYLRTGRLQVVSFLSDLPKTAHDLMGFAVDLLVFTPSIIVLTMNGV
YKETNTNGNPTRSFHRTFVIVPNAGGGFCIINDMLFVTNTTKEQEEKAFSTGVTVEPTPA
PVAPAPAAMAQPSPDDAQKMMLNMLSQQTGMNDHWSINCLQQTGWDFQRALFVFNQLNSE
GKIPPEAFVK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaacggtggcagaataagaaactttaagaacaatgacgcttttgagcatgat
gaccgaacacacacgagtaacacacggcgtgttagtttcaaaccaaacacgcataaagga
aagaacaaatggaacaatgttaaactgcagttggatgatgacgtgtacatggggggtact
ggcgagggcggcccgcatgtccaccgtaaaggagcatttagaggccgcggaggcaggctg
aactctccatcacctagaacaggtcatggcatggcgaagaagaagttcattgcaggtgtt
cttccctggtatcaaatcatcataccatatggggctaaacacgagaaagatgttattctg
aagactcttttgagctatatatcgccagacatctttgtgcctcactactacaagaccaat
ggcaatgcagccgtgttttatgtagatgatgttaaactggctgagaagctattccatgct
gacaggaagatcacaatgtccgatggcttcaagttaatggtgattgtaagaaactctgtg
cccaatgtcgctgttgatgctgaaatgaaggaaaagatgaagcttgctatggctaaaaga
tacaatgccacgacaaaggccttggacttgactaagttccatgcagatcctgacttggca
gatatattctgcgccctgttccgtccagtcataatgctggccgctatagatataattgct
gagaacattccggatcttgaggcattaaacctcaatgacaataaacttcatggtattgag
catctgaagattctctcttctaaactgaagaacttgaaaattctgtacatgggggataat
cggattccattccttggttccctggagcctttgaagaacttgcagctggtggagctatat
ctgaagggcaacccgttggtgaacaggttttccgataacgaaatctacgtcagcgatgtg
cggaagaagtttcccaagctggtcaaattggacggagtggaactgcccccagccatcggc
ttcgatgtcctagaagacgtgtcactaccattacgccagcaatctttcctcgtagacccg
gcaggacaggacttagtacgagagttcttaactcagtactttgcgatatatgatgcggag
tcacggcagccgttgcttgaagcttaccatgaacatgctactatgtccttggcagctact
tacttgagcaacgataataggaatgctgctacgcaaagattaaactcctacataacaaac
agtcgcaacattctgcgtataacggaacgcgagtcccggcgacgttacctgcgcacgggc
agactgcaagtcgtgtcattcctgtctgacttgccaaagacagcgcatgatttgatggga
ttcgctgttgatttacttgtttttactccgtcaataatagtgctaacaatgaacggagtc
tacaaagagacgaataccaacggcaacccgacgcgttccttccaccgcacgttcgtgatc
gtgcccaatgctggaggcgggttctgcatcatcaacgatatgctgtttgtcactaatact
actaaggaacaggaagaaaaagccttctcaacgggtgtaacagtagaacctactccggcc
cctgttgcgcccgcgccagccgccatggcacagccgtcacccgacgacgcgcagaaaatg
atgctcaatatgctgagccaacagactgggatgaatgatcattggagcatcaactgtcta
caacaaacaggatgggatttccaacgagccttattcgtcttcaaccaactaaactcagaa
gggaaaataccccccgaagcgttcgtcaagtga
DBGET
integrated database retrieval system
