KEGG   Helicoverpa armigera (cotton bollworm): 110376602
Entry
110376602         CDS       T05609                                 
Name
(RefSeq) protein CASC3 isoform X3
  KO
K14323  protein CASC3
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03013  Nucleocytoplasmic transport
haw03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110376602
   03015 mRNA surveillance pathway
    110376602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haw03019]
    110376602
Messenger RNA biogenesis [BR:haw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110376602
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 110376602
NCBI-ProteinID: XP_063897481
LinkDB
Position
25:complement(join(2272690..2272904,2274135..2274223,2274490..2274620,2276894..2277061,2277486..2277547,2277854..2277938,2278602..2278694,2279145..2279209,2279616..2279810,2280346..2280457,2280913..2281006,2281508..2281726,2282093..2282227,2283638..2283732,2284379..2284523,2286150..2286250,2295826..2295903,2296165..2296254))
AA seq 723 aa
MTSVARRREHEDSGEYSDASQEIEHNNSGNDGGQNESDYDSQGSDSEHSDQDSENKESER
RVDDDEDRSNPQYIPKRGTFYEHDDRTAASGEESTNTTSEAASEKKEGAEPPAERRRPPR
KSEIVNKWSHDKYNENEQMPKSRDELVAIYGYDIRNEDAPPHARRNRRYGRGPNKYTRTW
EDEEAYRRQSAAQQVPRKPPTAEDFPELDAGRRHGKPRSPRPRSKSQPSSTSPVENGSLR
RNASIKTAKKPTVKQGTGRVAVKVPKPKEKVSMPPLENLTITASVNNNQGQAPRKVSAVA
QQRPVPTDQARKKSNANAQQPQSQSSQPANKSPPQQQSGQQQQQQKTQQNQQQPPAGGGG
SKRYSSLRQRPLADSYSPQQPQQQQQQQQQQPQQQQQQQQQQPQQQQQQPAQQQQPHRYH
AGPNEFVGGNAQAHAHPQHIMHQQVMVSGANSHAASPPHALPAPPAAHASHASQVRLGMM
EQQSMPVPHHHNMHNMQAPHNMGQIQQAQGYAPPAMMPAQYMQQSNSGAVFGGAMYPAAP
HGAPHAAPHGAPHPAPHAGPHGQAHPTYQHQMYTPHHNYMGVPPAGGVTYYNCAEQEPPA
PQPRPQRRPTAAIPIVSPHHADRPANSSEKDNIDRIVENMFVRKPWPATHGADSKEKQPD
NRSSQEPQSKESSQPNSLTSSSISTDSKPSESREEPQKPTEVKEEVREPVESAVTQESIA
TDA
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgacgtccgtggctaggagacgggagcacgaagattccggagaatattcggacgcatcg
caagagatcgagcacaataactccgggaacgatggtggtcagaacgagtcggattacgac
tcccaggggagtgactccgaacattcggatcaagattccgaaaacaaggagtcggaacgt
cgagtagacgatgatgaggatcggagcaatccccagtacatccccaaaaggggaactttc
tatgaacacgatgacagaactgcggccagtggagaagaatcaaccaacacaacatcagag
gcggcctcagagaagaaggaaggcgccgagccgccggccgagcgccgccgtccgccccgc
aagtccgagatcgttaacaagtggtcgcatgacaagtataatgagaacgaacagatgccg
aagtcccgtgacgagctagtagctatctacgggtatgacataaggaatgaagacgcacct
ccccacgccaggcgcaaccgtcgatatggtcgcggtcccaacaagtacactcgtacatgg
gaggacgaggaggcttacagaagacagtcagcagctcagcaggtgccgaggaaaccgccc
acggctgaggacttccctgaacttgatgctggaaggagacatggcaaaccccgttccccg
cgaccccgttcaaagtcccagccatcttccacgtcccccgttgagaacggctctctccgt
cgcaacgcttccatcaaaacggccaagaagccgaccgttaagcagggcacgggccgcgtg
gccgtcaaggtgcccaaacccaaggagaaggtgtccatgccgccgctggagaacttgact
ataaccgccagtgttaataacaatcaaggtcaggccccgcgcaaggtgagcgcggtggcg
cagcagcggcccgtgcccactgaccaggcgcggaagaagagtaatgctaatgcacagcag
ccacaatcacaatcgagccagcccgcgaacaagtctccgccgcagcaacaatccggtcag
caacaacagcaacagaagacgcaacagaatcagcaacagccgccagccggtggcggtggc
agcaagcgatacagcagtttacgtcagcggccactcgctgattcttactccccgcaacag
ccacaacaacaacaacaacagcaacaacaacagccacagcaacaacaacagcagcaacag
caacagcctcagcaacaacagcaacagcccgcccagcaacagcagccgcatagatatcat
gctggtccgaacgagttcgtgggcggcaacgctcaggcccacgcgcatccacaacacatt
atgcaccagcaagtgatggtaagcggcgccaacagtcacgcggcgtcgccgccgcacgcg
ctgcccgcgccgcccgctgcgcatgcctcacatgcgtcacaggtgcggctaggcatgatg
gagcagcagtcgatgccggtgccgcatcatcacaacatgcataacatgcaagcgccacac
aatatgggtcaaattcagcaagcacagggttacgcaccgcccgccatgatgccagcgcag
tatatgcagcaaagcaacagcggcgcagtattcggtggagcgatgtacccggcggccccg
cacggggccccgcatgcggccccacatggcgccccgcaccccgccccgcacgcgggcccg
cacgggcaggcccatcctacctaccagcatcagatgtatacgccgcatcataattatatg
ggcgtcccccccgcgggcggcgtgacgtactacaactgcgcggagcaggagccgcccgcg
ccgcagccgcggccccagcgccgccccaccgccgccatacccatcgtcagcccgcaccat
gccgacaggccagcaaattcgtctgaaaaggacaacatagacaggatcgtggaaaacatg
ttcgttcggaaaccctggcctgcgacacatggggctgattcaaaagaaaaacagccagac
aaccgtagttcacaagagccacaaagcaaagagtcttcccagcccaacagcttaacttcc
agttccatctccaccgactccaagccttctgagagcagagaagagccccagaagccaaca
gaagtgaaagaagaggttagggagcccgtagaatccgcagttactcaggaaagtatagct
acggatgcctga

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