Helicoverpa armigera (cotton bollworm): 110377066
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Entry
110377066 CDS
T05609
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03013
Nucleocytoplasmic transport
haw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110377066
09122 Translation
03013 Nucleocytoplasmic transport
110377066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110377066
03041 Spliceosome [BR:
haw03041
]
110377066
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110377066
Spliceosome [BR:
haw03041
]
Complex C
Other components
EJC/TREX
110377066
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110377066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_Gbeta
ANAPC4_WD40
Beta-prop_Aladin
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
PAC11
DSE1_N
RMC1_N
Tricorn_2nd
Beta-prop_WDR35_TULP_N
WD40_RFWD3
TRM82_WD
NBCH_WD40
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_ELP1_1st
PD40
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
110377066
NCBI-ProteinID:
XP_049705274
LinkDB
All DBs
Position
21:complement(join(8946306..8946466,8947155..8947255,8947655..8947816,8948277..8948380,8949070..8949205,8949750..8949871,8949971..8950174))
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AA seq
329 aa
AA seq
DB search
MKEPKSTQSAIEDLAELRSYFASHNLVREYVAHSSKVHSVGWSCDGRRLASGSFDKSVAI
FTLERNRLVQDFIFRGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRTHKCAATIATK
GENINIAWSPNGSTIAVGNKEDLVSFIDTKTYKVVVEEQFNFEVNEISWNNTSDLFYLTN
GLGCVHILSYPSLELQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWDVNELACLRV
FSRLEWPVRTLSFSFDGRMLASASEDHIIDIGDTETGEKVAEIPVLASTFTVAWHPSRYV
VAFACEDKEPPERKRDAGNLKLWGLPNNS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcctaaatctacacagtctgcaatagaggatttagctgaactacgaagttat
ttcgcttcacacaacctagttcgggaatacgtagctcattcttcgaaagtacattcggtt
ggatggtcttgtgatggtagacggctggcctcggggtcttttgacaaaagcgttgctata
tttactcttgagagaaatagactggtccaagactttatattcagaggtcacactgggtca
gtagaccagctctgctggcacgcttcacatcctgacctgttgagtactgctagtggagac
aaatcagttagaatatgggacacaaggacacacaaatgtgcggccaccatagctacgaaa
ggcgagaacatcaacatagcctggtcgcccaacggcagcaccatagcagtcggcaacaag
gaggatctagtatcctttattgacaccaagacttataaagtagttgtagaagaacagttt
aactttgaagtgaatgagatctcatggaataacacatctgacttattctatctcactaat
ggattaggctgtgttcatatattgtcctacccatccctggagctccagacagtgctgaag
gcgcacccgggcacgtgcatctgcatcgagcacgatcccacgggccggtacttcgccacg
ggctccgctgacgcgctggtgtcgctgtgggatgttaacgagcttgcttgtctgagagtg
ttctctagactagaatggccggtgcgtacactatcgttcagtttcgacgggcgcatgctc
gcgtccgccagtgaagatcatatcattgatattggagacactgagactggtgagaaggta
gcagagatcccggtgctggcgtcgacgttcacggtggcgtggcacccgtcgcgctacgtg
gtggccttcgcctgcgaggacaaggagccgcccgagcgcaagcgggacgccggcaacctc
aagctctggggactgcctaataatagctag
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integrated database retrieval system
