Helicoverpa armigera (cotton bollworm): 110377073
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Entry
110377073 CDS
T05609
Name
(RefSeq) uncharacterized protein LOC110377073
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
haw
Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haw03021
]
110377073
Transcription machinery [BR:
haw03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
110377073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
110377073
NCBI-ProteinID:
XP_049705230
LinkDB
All DBs
Position
21:complement(join(8951986..8955199,8955670..8955826,8956588..8956780))
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AA seq
1187 aa
AA seq
DB search
MQSEPCAVCSGTELELKDGFYYCMECGTQNTDVRETVVEDKALGNGTFAVGTRKKILTRD
NETQMSAEWYKWHAYNFIISGLADELVLAGAKPSFKLKLLWIWTRYMKKYQKKEDMGLAR
NPADGNAENITLPSFMVEENSTSNPVPDDETEQDIDEGAKKPYKKNVIVEGSKRDIKFLS
RGVIMAMLYLALNLDESDIQLSHIIRFIKEKHLNFSNITRFLPKDINVKTIQGQWTSFIN
SKVCNVHTVRKLAMSLLRKLDLGTPKVPNLRKIVDNILTELCLPNDIKPLVYALMHFNRC
EFMDVSNKTKDHLIKLPDYEGIVMSYVLVAMKMCFGLDGHYEEKLSDAVEKINNDRNLPK
SHKIGKYSEPSTRLFSFREWCSYMQFRKMTLCQSCLNMAEQHCLDIDDYVYMEHVGEMAE
NNKDLQDETAMDIISRIPTEDEGRVIPKHLFLPSLTPMSDYTEIIMYHSQDPGMLSEDFT
QYSLKYACEHLELVDTNAENIIRGVSEEGKITNELILGTIIQKKSKTEMVYVKNCENKNW
MITKPPKMEHVLCEEEQNTSNGDQSTIVEKESNQNVSNDKEVDQNISNVKESDLNMSEDK
EVDQNISNDIPCLPLNYREPDQNISNNREPGQNTLNDREPDQNMSNGREPDQNILNDREP
DQNILNDREPDQNILNDREPDQNILNDREPDQNISNDREPDQNISNDREPDQNMSKDGES
DHGYDSEHPTSERVVSQDIQITFEEVDENDQPVKEDQPVKEEQRPVIIIEEDKDNNIFDD
TFLELDIKDQIEQEQLEDLNIEDQPWQNNHSIQEDRASISDVSDYGSEMTQFNPDTFNRE
QTIKELILNACKKYKIPTPSEYKTKEKVQRKRKTGVFGSEDGPSVPRKRNKINKYKVEEL
ISSYKTQMQSDLLTRMQNDVHLAIKNPRLDESANPANEPASDALSVRTSVSVDNAENQSI
VDPQSSVIQQNDNDQEQNPEETEVIDEEYESKLFENDEQMEIDDLIKKSDPKFDEKKYNT
EQLYIKVKEEDVSVDDIFDLSINPELEEIITKKIEQNKERAEFENLKAGPSKVKTKYESD
SEDEIPLKTIQEDKKKIEEMLEWEENFEPLINKDDLPEFKYWVRHYDKDFMTRSQDWHKK
FDDELKENTPSSFFFVIGECAAILSSSTFTLYKHMQNLESYIIARAK
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgaaccttgtgcagtgtgtagtggtacagaattagagttaaaagatggattt
tactactgcatggaatgtggtactcaaaacacagatgtacgagagaccgtggtggaagac
aaggctttgggaaacggcacctttgctgtaggcacgagaaagaaaatcctaacaagagat
aatgaaactcaaatgagtgcagaatggtacaaatggcatgcctacaacttcataatatca
ggtctggctgatgaactggtattggctggagctaaacccagctttaagctaaaactcctg
tggatctggactcggtacatgaagaaatatcagaagaaagaggatatggggctagcaaga
aatcctgcagacggaaatgccgaaaatattacattgccaagttttatggtggaagaaaat
agtaccagtaacccggtacctgatgatgaaactgaacaagatatagatgaaggagcaaag
aaaccttacaaaaagaatgttatagtcgaaggctctaagagagatatcaaattcctatca
agaggtgtcataatggccatgttatacttagcactaaatctagacgagagtgacattcaa
ctatctcatatcataaggttcattaaagaaaaacatctcaatttttccaacataacaaga
tttttgcccaaagatataaatgtgaaaactatacaaggacagtggacgtcatttattaat
agtaaagtatgtaacgtccatacggtgcgaaaacttgctatgtcactgttgaggaaacta
gatttaggaacgccaaaagtaccaaatttaaggaaaatagttgataatatactgacagaa
ctctgtctgccgaatgatataaaacctttagtttacgcgttaatgcatttcaaccgttgt
gaattcatggacgtgagtaacaaaactaaagatcatttaataaaattgccagactacgag
ggcatagtcatgtcttacgtacttgtcgctatgaagatgtgttttggcctagatggccat
tatgaagagaaactatcagacgcagtagaaaagataaataacgaccgtaatcttccaaaa
tcgcacaaaattggaaagtactcagaaccaagtacgaggctgttttcgtttagagaatgg
tgcagttatatgcaatttaggaagatgacactttgtcaatcttgtctgaatatggctgag
caacattgtttagatatagacgactatgtttatatggaacatgtgggtgaaatggcagag
aataataaagacttgcaagatgaaaccgcaatggatataatcagcaggatacctacagag
gatgaagggagagttattcccaaacatctgtttttaccatctctcacaccaatgtcagat
tacactgagatcataatgtatcacagccaagatccaggtatgctgagcgaagatttcact
caatattctcttaaatatgcttgtgaacatttagaattggtcgacacaaatgcggaaaat
attatcagaggtgtaagtgaagagggcaaaattactaacgaacttattctaggcacaata
atacaaaagaaaagtaaaactgaaatggtttatgttaagaactgtgagaataaaaattgg
atgataacaaaaccacctaaaatggaacatgttttgtgtgaagaagagcaaaacactagc
aatggtgatcaaagtacgattgttgaaaaagaaagtaatcaaaatgtgagtaatgacaag
gaagttgatcaaaacataagcaatgttaaagaaagtgatctgaacatgagtgaagacaaa
gaagttgatcaaaatatctcaaatgacattccctgtcttcccttaaattacagggaacct
gatcaaaatatctcaaataacagagaacctggtcaaaataccttaaatgacagggaaccc
gatcaaaatatgtcaaatggcagagaacctgatcaaaatatcttaaatgacagagaacct
gatcaaaatatcttaaatgacagggaacctgatcaaaatatcttaaatgacagagaacct
gatcaaaatatcttaaatgacagggaacctgatcaaaatatctcaaatgacagagaacct
gatcaaaatatctcaaatgacagggaacctgatcaaaacatgagcaaagacggagaaagt
gatcatggttatgattcggaacatccaacaagtgaaagagtagtttcccaagatatccaa
attaccttcgaagaggtagatgaaaacgatcagcctgtaaaagaggatcagcctgtaaaa
gaggaacaaagaccagttattataatagaagaagataaagataacaatattttcgacgac
acatttttagagctagatataaaagatcagatcgagcaagagcagcttgaagatctaaat
atcgaagatcagccttggcagaacaatcatagtatccaagaagatcgcgcgagtattagc
gatgtttccgattacggttccgaaatgacgcaattcaatccagatactttcaatagggaa
caaactattaaagagttaattttaaatgcttgcaaaaaatataagattcctactccctct
gagtataaaaccaaagaaaaagtacagaggaaaaggaaaactggagtgtttggtagtgaa
gatggtccgagtgtacctagaaaaagaaataaaatcaacaaatataaagtagaagagcta
attagtagttacaaaactcagatgcagtcagatttactaactagaatgcaaaatgatgtc
catttagctattaaaaaccctaggttagatgaatcagctaacccggcaaacgaaccagct
agtgatgccttaagtgtaagaacttccgtaagtgttgacaatgcagaaaatcaatcaatt
gttgacccacaaagtagtgtaatacaacagaacgataatgatcaggaacaaaatcctgaa
gaaactgaagttatagatgaagaatatgaatcgaaactattcgagaatgacgaacaaatg
gaaatagatgatcttataaagaaaagtgatcctaaatttgacgaaaaaaagtacaataca
gaacaattgtatataaaagtcaaggaagaagatgttagtgtagatgatattttcgattta
tccatcaatcctgaactagaagaaataatcactaaaaagattgaacaaaacaaagaacgt
gcggaatttgagaatttgaaagctgggcctagtaaggtgaaaacaaaatatgaaagtgat
tctgaggatgaaatcccgttaaaaactatacaagaagataagaagaaaatagaggaaatg
ttagaatgggaagagaattttgaacctttgataaataaggatgatttaccagaatttaaa
tactgggttaggcattacgacaaggatttcatgactagatcacaggattggcacaaaaag
tttgatgacgaattaaaggagaacactccaagtagtttcttcttcgtcattggagaatgc
gccgccattttgagttcttcaacttttactctttataaacacatgcagaatctggagagt
tacatcattgctagggcaaaatag
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