Helicoverpa armigera (cotton bollworm): 110377205
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Entry
110377205 CDS
T05609
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110377205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110377205
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110377205
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110377205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
110377205
NCBI-ProteinID:
XP_021191667
LinkDB
All DBs
Position
23:complement(join(4059696..4059770,4060213..4060348,4061002..4061166,4061328..4061532,4061677..4061709,4062051..4062245,4063039..4063222,4063733..4064002))
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AA seq
420 aa
AA seq
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MANLNFQQAPRSLASGGVGGRVSSGLVGGVSGHVTPTFGGALSPGRNSTAMPGGAPPSMA
SRSTLFGQRAFADRRVPIPNALSQPNSNSMSSMGNLSRFNTSSNYHSVFGEGGDTSTPPL
LDLSEFPSLTARGAGDQAPAAAPPPPGSKPYVGMVKQPTSEQSEFTMSSEDFPALPGTSS
AGGTAPLPPPGPLPPPPDFSNHTNDKPRKGIQTSPDVISQGAHTEFYGKVTNIPETMIPN
QFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLYLTFAGPWADTPCRPQDM
DYHVPPEYLINGSIREKLAPLRLNRYKEDLLFYLFYCFVGDVLQIAAAAELYNREWRYHM
EEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVAKEFHLDYSKLEGRPQLPAHVLT
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttgaatttccaacaagcacctagaagcctagcgagcggcggagtgggcggt
cgcgtgagctcggggctggtgggcggcgtgtcgggccatgtgacgcccacgttcggaggc
gcactgtcgcccggccggaactccaccgccatgcccgggggcgctccgccctctatggca
tcgcgatcaacactattcggccagcgggcttttgccgaccgcagggtacccataccaaac
gcgttatcgcagcctaactcaaattccatgtcgagtatgggcaacttgtcccgattcaac
acaagcagcaactaccactcggtgttcggagagggcggagacacgtcgacgccacctcta
ctggacctcagcgagttcccctcgctgaccgcgcggggggcgggcgaccaggcgccagcc
gccgcgccaccgccgcccggctctaaaccttacgtgggtatggtgaagcagcctacatct
gagcagtcagagttcacgatgtcttcagaggacttcccggcgctgccgggcacgtcgagc
gcgggcggcacggcgccgctgccgccgcccggcccgctgccgccgccgcccgacttcagc
aaccacaccaacgacaagcctaggaagggcatacaaacctcacccgatgttatcagtcaa
ggagcacatacggaattctatggtaaagtaacgaatataccagagacgatgataccgaac
cagtttggtatcgtgggactgttgacgtttattcgcgcagcggaatcggaccccagttta
gtgtcgctggcgttagggcaggatctcactgcgctcggattgaatctaaattcaccagac
aacctttatctcacctttgctggcccttgggcggacacgccgtgcagaccacaagatatg
gactaccatgtgcctcccgaatatctaatcaatggttcaattagagaaaagttggcgcct
ctacgactgaatcgatataaggaagacctcttattttatttgttctattgtttcgtgggt
gacgtgctgcaaatagcagctgcagccgaactctacaaccgcgaatggcggtatcacatg
gaggagaaggtgtggatctcgcaggcgcccggcatgccgatggtggagaagacgtctacg
tacgagcgcggcacctattacttctttgatgcgcacaactggcgtaaggtggcgaaggaa
ttccacttggactacagcaagctggagggtcgaccgcaactgcccgctcacgtgctcacg
tag
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