Helicoverpa armigera (cotton bollworm): 110377688
Help
Entry
110377688 CDS
T05609
Symbol
Caf1-55
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03082
ATP-dependent chromatin remodeling
haw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110377688 (Caf1-55)
03083 Polycomb repressive complex
110377688 (Caf1-55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haw03036
]
110377688 (Caf1-55)
Chromosome and associated proteins [BR:
haw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110377688 (Caf1-55)
Histone modification proteins
HAT complexes
HATB complex
110377688 (Caf1-55)
HDAC complexes
Sin3A-HDAC complex
110377688 (Caf1-55)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110377688 (Caf1-55)
PRC2.2
110377688 (Caf1-55)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110377688 (Caf1-55)
Heterochromatin formation proteins
Other heterochromatin formation proteins
110377688 (Caf1-55)
Chromatin remodeling factors
NuRD complex
110377688 (Caf1-55)
NuRF complex
110377688 (Caf1-55)
NuRF complex (fruit fly)
110377688 (Caf1-55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
110377688
NCBI-ProteinID:
XP_049706655
LinkDB
All DBs
Position
18:complement(join(8105559..8105651,8106313..8106490,8106951..8107081,8107402..8107519,8107929..8108111,8108464..8108538,8108735..8108939,8109265..8109380,8109940..8110117,8110239..8110260))
Genome browser
AA seq
432 aa
AA seq
DB search
MGDKGDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIDIE
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEGRVIEAKSVFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQTAED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPA
SELESGVNVNHG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaaaggagacggagaaacctttgatgatgccgttgaagagagggtaatcaat
gaggagtacaaaatatggaagaagaataccccgttcttgtatgatttggtgatgacacac
gctctggaatggccctcgttaactgctcagtggcttccagacgtgaccagacccgaaggc
aaggactactccgttcatagattaatcttgggcacacacacatcagacgaacagaaccat
ctactgattgccagtgttcagctgccaaatgaggatgcacagtttgacgccagccactac
gacaatgataaaggagaatttggtggctttggctcagtgtcgggtaaaatcgacattgag
ataaagatcaaccatgaaggtgaggtgaacagggcacgttatatgccccagaacccctgt
gtcattgccaccaagacaccttcctccgatgtgctggtctttgactacactaagcatccg
tcaaagcctgaaccttccggcgagtgtcaccctgaccttagattgcgaggtcatcaaaaa
gaaggctatggcttatcctggaaccccaacctaaatggatatcttctgtctgccagtgat
gaccacacaatctgcctgtgggacataaacgcgacgccgaaggaaggccgcgtgatcgag
gccaagtccgtgttcacgggacacaccgccgtcgtcgaggacgtggcctggcatctgctg
cacgagtcactgtttggatccgtcgctgatgatcagaagctcatgatttgggacactagg
tgtaacaacacttcgaagccctctcacacagtggacgcgcacaccgcggaggtgaactgc
ctcagctttaacccctactccgagttcatactagccaccggcagtgctgataaaaccgtg
gcgctatgggacctgcgcaacctgaagctgaagctgcactcgttcgagtcgcacaaggac
gagatcttccaggtgcagtggtccccgcacaacgagaccatcctcgccagcagcggcacc
gacaggaggcttcacgtgtgggatctgtccaagatcggcgaggagcagacggcagaggac
gcggaggacggacctccggagttgctgttcatacacggaggtcataccgccaagatatct
gacttctcctggaaccctaacgagccctgggtcatctgctctgtgtcggaagataatatt
atgcaggtatggcaaatggctgagaacatatacaatgatgaagaaccggagacgcccgcc
tcggaactggagtcgggcgtcaacgtcaaccacggctag
DBGET
integrated database retrieval system
