Helicoverpa armigera (cotton bollworm): 110378103
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Entry
110378103 CDS
T05609
Name
(RefSeq) probable ribonuclease ZC3H12D isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110378103
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110378103
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_4
RuvA_C
zf-CCCH_2
PaaX
DUF6275
Motif
Other DBs
NCBI-GeneID:
110378103
NCBI-ProteinID:
XP_049701766
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All DBs
Position
18:join(3597036..3597260,3607443..3607613,3608088..3608320,3608739..3609894)
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AA seq
594 aa
AA seq
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MSLDTDLIISVPRSRINEFYCKYHNLVETFYCVTLSENKSCFANEKPDYVYFNVTFNLNP
ADGSFNPKELVGRIQKYVESSLGWGGERGEDSSYDSECEDESAHRAASRTPSDTLAAEFA
EYVTLTPPQPSQAKIEFAVKLGYSERLARTALQRLGPDPPCNELLAELIKLAAKQPPRAP
SPAPLPDPELPPERAPLRHIVIDGSNVAMSHGNKEVFSCRGIEICVEWFRARGHREITAF
VPKWRKESSRPNNPIAERDALERLERDRVLVYTPSRLLGGKRLVCYDDRYILRLAAETDG
IVVSNDNYRDLAVENPDFRKVVEERLLMYSFVNDRFMPPDDPLGRSGPTLDAFLRAPATR
ADPPPACPYGRKCTYGNKCKFHHPERAGRPQKSVAEKLSERAARTLRERDLHTMSLPPGG
RPADVKKQLARAQSAAPRLADATLATHFDRAQLQVAGPSQPLVPAGPPPDVNPHRKLARQ
LTLNPACDPRLQQHALAARVASAPGGAVGAAAGLGAAGGLGAAGALAPLGTPCVSDGALQ
HWDARRRMHYHLAGIFPEAQVAQAMAAYPEETDAQTMCAIILARYRPSEARVPH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgatacggacctcataatatcggtgccgcgttctcgtattaatgaattttat
tgcaagtatcataatttagtagaaacattttactgtgtcacactgtctgagaataaatcg
tgtttcgcgaatgaaaaacctgattatgtgtatttcaacgtcacgttcaacttgaatcca
gcagatggaagtttcaatccgaaggaacttgttggaagaatacagaaatatgtggagtca
tctcttggatggggtggcgagcgcggcgaagactccagctatgactcggagtgtgaggac
gagagcgctcatcgtgcggcctcccggactccctctgacaccctcgccgcggagttcgct
gaatacgtcaccctgacaccgccgcaacccagccaggcaaagatcgagttcgcagtgaag
ttgggttactcggagcggctggcgcggacggcgctgcagcggctgggcccagacccgccg
tgcaacgagctgctggcggagctgatcaagctcgcggccaagcagcccccccgcgcgccg
tcgcccgcgccgctccccgaccccgagctgccgcccgagcgcgcgccgctccgacacatc
gtcatagacggcagcaatgtcgctatgagccatggcaacaaggaggtgttctcgtgccgc
ggtatcgagatctgcgtggagtggttccgcgcgcgcggacaccgcgagatcaccgccttc
gtgcccaagtggcgcaaggagtcctcgcgccccaacaaccccatcgccgagcgagacgcg
ctcgagcgcctcgagcgagaccgcgtgctcgtgtacacgcccagccgcctgctcggcggc
aagcgcctcgtctgctacgacgaccgttacatcctgcgcctggctgccgagaccgacggc
atcgtcgtctccaatgacaactaccgcgaccttgccgtcgagaaccctgacttccgaaag
gtagtcgaggagcgactgcttatgtactcgtttgtcaacgaccggtttatgccacccgac
gacccgctcggtcggtccggtcccacgctcgacgcgttcctgcgagcgccggcgactcgc
gccgacccgccgcccgcgtgcccgtacggccgcaagtgcacgtacggtaataagtgtaag
ttccaccacccggagcgagccgggcggccgcagaagtccgtcgcggagaaactgtcggag
cgcgccgccaggacactccgcgagcgcgacctgcacaccatgagcctgccgcccggcggc
cgccccgccgatgtcaagaagcagttggctcgcgcgcagtccgccgcgccgcgactcgcc
gacgccacgctcgccacgcacttcgaccgcgcgcagctgcaagtggccgggccgtcgcag
ccgctggtgccggccgggccgccgcccgacgtcaacccgcaccgcaagctagcgcgccag
ctcacgctaaacccggcgtgcgacccgcgcctgcagcagcacgcgctggcggcgcgcgtg
gccagcgcgccgggcggggcggtgggcgcggcggccgggctgggagcggcaggtgggctg
ggcgcagcgggcgcgctggctccgctggggacgccgtgcgtgtcggacggcgcgctgcag
cactgggacgcgcggcgccgcatgcactaccacctggcgggcatcttcccggaggcgcag
gtggcgcaggcgatggcggcgtaccccgaggagacggacgcgcagaccatgtgcgccatc
atcctggcgcgctaccgccccagcgaggcgcgcgtgccgcactga
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