Helicoverpa armigera (cotton bollworm): 110378144
Help
Entry
110378144 CDS
T05609
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haw03009
]
110378144
Enzymes [BR:
haw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110378144
Ribosome biogenesis [BR:
haw03009
]
Eukaryotic type
Pre-60S particles
Helicases
110378144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
110378144
NCBI-ProteinID:
XP_063893318
LinkDB
All DBs
Position
12:complement(join(3157894..3158069,3158444..3158594,3159049..3159184,3159678..3159817,3160049..3160162,3160464..3160655,3161052..3161284,3161620..3161830,3162165..3162511,3162897..3163080,3163332..3163511,3163713..3163910))
Genome browser
AA seq
753 aa
AA seq
DB search
MTKPKELEDHVPGFEAPDEGDSQDETQNNKKKKKSSGGFQSMGLSFPIIKGITKRGYKQP
TPIQRKTIPLALTGKDVVAMARTGSGKTACFVLPILEKLLAPNSKPLPGKNFRALILSPT
RELALQTLRFVRELGKFTGLSSAAILGGESIDQQFSVMSGTAPDIVVATPGRFLHICIEM
SLKLDNIKVIVFDEADRLFELGFGEQLREIVARLPSTRQTLLFSATLPKMLVEFARAGLT
DPTLVRLDVDWKLPSTLWLGWVAVRAELKTAALLILLDRVLTAKTPQAVVFAATKHHVEY
LNLILQQAGISSTYAYSGLDASARKIALGRFTNKKCSVLIVTDVAARGLDLPALDTVINY
NFPAKPKLFVHRVGRSARAGRAGRAFSLIAPEDVAHLLDLQLFLGAEMISPGQVKERGLA
CPSGVWGAVPTSLLELRHQDVMAWEKNYSEIEDAARVCGRGWQQYIKWREPASAEANKRA
KITSFPVLTHPFLVDENDDAAVDMIEKIKNYTPKGTILELSAKNDSPMYLAMKKKKQAHG
KTVQKVRDIKKLKAEGILEDTSNTKLSRPPNQPPKKKKKEVVRDENYISHYASDQHTEMG
MAVNFAVGAEQAQLELNADSGDGARAHKAMLRWDRKRKKMVHVDPDGGRKMIRTESGGRV
PASYRSGRYDEWRKRNAADAGSDDEQPQDTNRKKSASEFRPHWVKHNERIAKKSAEAKSK
EFKNKQQIVKERIRKEKIKQKLKFKNNKKKKKK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacctaaggaattggaagaccatgtgccaggttttgaagccccagatgagggg
gacagccaagatgaaactcaaaataataagaagaaaaagaagagttctggtggatttcag
tccatggggctgagtttccctataataaaaggtataacaaagcgaggatataaacaaccg
acacctattcagcgtaagacaattcctctagctttaactggcaaagatgtggtggccatg
gcacgcacgggctcaggaaaaacagcatgttttgtcctcccaattctggagaaactgctg
gctccgaatagcaaacctttacctggaaagaatttcagagctttgattctatcacctact
cgggaattggcgttacagacgctaaggtttgtacgagaactgggcaagttcactggctta
tcttctgctgcaatacttggtggagagtcaatagaccagcagttcagtgtaatgtccggt
acagcaccagatattgtggtggcaacccctggccgtttcctacacatctgtatagaaatg
agcttgaaactggataatataaaagtaattgtatttgacgaagctgaccgactcttcgag
cttggtttcggcgaacaactccgagaaatagtcgcccggctaccatcaacccgtcaaacg
ctgcttttctcagcaaccctgccaaaaatgcttgtagaattcgcgagggcgggtctcaca
gaccctacacttgtaagattggacgttgactggaaattgccatcaactttgtggcttggc
tgggttgcagtgagggcggagttgaagaccgcagccctattgattttgctggatagagtt
ttgactgcgaaaactccacaagctgttgtatttgctgctactaagcatcatgtggagtat
ttgaatttgatattacaacaagcaggcatatcatcaacttacgcatactccggcctagac
gcctccgcacgtaaaatcgcgctcggccgattcacgaacaagaaatgttcagtacttata
gtaactgatgtcgccgctagaggattggatctcccggctttggacactgttattaattac
aacttcccagctaagccaaagctttttgtgcatagagttggtcgtagtgcccgcgccggc
cgtgcgggtagagcgttctccctcatcgccccagaagacgtggcacatttactagacctg
caactgttcttgggagccgagatgatatcccccggacaagtgaaggagagaggattggcc
tgtcctagcggtgtgtggggggcagttcccacgtcactgctggagttaagacatcaggat
gttatggcttgggagaagaattattcggagattgaagacgcagcccgtgtctgtggccgc
ggctggcagcagtacataaaatggcgcgaacctgcatcagctgaggcgaacaagcgcgcc
aagataacgtccttccccgtactcacgcaccccttcctagtggacgagaacgatgacgcc
gctgtcgatatgattgagaagatcaagaattatacgcctaaaggaacaatattagagctg
tcagctaagaacgattcgcctatgtatttagctatgaagaagaagaaacaagctcacgga
aaaactgtacagaaagttcgggacattaagaaacttaaggctgaaggtatactagaagac
actagcaacacgaaactaagccggcctccaaaccaaccgcccaagaagaagaagaaagag
gtggttcgcgatgaaaactatatctcacattacgctagcgatcaacatactgagatgggc
atggcagtaaacttcgcggtaggcgcggaacaagctcagctggagttgaacgcggacagc
ggggacggtgcgcgagcgcataaggcgatgctgcgctgggacaggaagaggaagaagatg
gtgcatgttgatccggacggcggtcgtaaaatgatccgcacagagagcggcggtcgcgtg
ccggcgtcctaccgcagcggccgatacgacgagtggcggaaacgtaacgcggctgatgcg
ggctccgatgacgaacagcctcaggatactaataggaagaaatctgcatccgagttccgt
ccccactgggtgaaacacaacgagcgcatagccaagaaatcagccgaagctaagtctaaa
gagttcaagaacaaacaacaaattgttaaggaaaggatacgcaaggaaaagattaagcag
aaacttaagtttaagaataacaagaaaaagaagaaaaaataa
DBGET
integrated database retrieval system
