KEGG   Helicoverpa armigera (cotton bollworm): 110378452
Entry
110378452         CDS       T05609                                 
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
haw  Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:haw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haw03021]
    110378452
Transcription machinery [BR:haw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     110378452
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_19 TPR_8 TPR_14 TPR_12 TPR_CcmH_CycH TPR_17 TPR_16 TPR_11 TPR_10 TPR_6 ARM_TT21_5th TPR_7 TPR_9 TPR_Slam Coatomer_E ARM_TT21_4th ANAPC3 DUF6584 Fis1_TPR_C
Other DBs
NCBI-GeneID: 110378452
NCBI-ProteinID: XP_049703522
LinkDB
Position
7:join(2972612..2972647,2972734..2972832,2973301..2973540,2973712..2973980,2974422..2974617,2974981..2975208,2975668..2975874,2976579..2976733,2976998..2977168,2977426..2977640,2978048..2978205,2978615..2978743,2979020..2979484,2979905..2980116,2980654..2980777,2981085..2981338,2981523..2981651,2981740..2981859,2981938..2982160)
AA seq 1209 aa
MSLEIPLMSTDEVIELDPEQLPSGDEVLSILQQEKSQLNVWINVALAYYKQKKIDDFLKI
LEASRTEANIDYRDFERDQMRALDMLAAYYVQEANKEKVKDKKKELFTKATLLYTMADKI
IMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGAL
AFYKKALRTNPDSPAALRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVGLSILKL
NLQESESNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEA
MRAESCHHLARAFHAQGDCDQAFQYYYQATQFAPPNFVLPHYGLGQMYIYRGDTENAAQC
FEKVLKVQPGNYETMKILGSLYANSPSQSKRDIARQHLKKVTEQFPDDVEAWIELAQILE
QNDLQGSLNAYSTAMKILKEKVNADIPAEILNNVAALHYRLGNLNEAKNYLEEALEREKA
DAETLDAQYYNSIAVTTMYNLARLNEALCVYNKAEKLYKDILKEHPNYIDCYLRLGCMAR
DKGQIYEASDWFKEALKVNTEHPDTWSLLGNLHLAQQEWGPGQKKFERILQNSSTSNDAY
SLIALGNVWLQTLHQPCREKDREKRHQERALAMYKQVLKNDPKNIWAANGIGCVLAHKGC
VNEARDIFAQVREATADFPDVWMNIAHIYVEQKQYINAIQMYENCVRKFRMHHDVEWLTW
VARAQTLAGRAGAARASLLRARRVAPHDAALAYNTALTLRRRAALVLKDDRSDLRLVLRA
VHELHVSHRHFSRLAGATPDATARPDASAATAEARTCADLLSQAQWHVARARRQHDEEVT
LRDRQREQREAFRRQQEEERKRREEEQQKSTVEMLQKRQEYKEKTKNALLFADMPTENKS
KGGRGRRRDEYVSDSPGSGSEGPREDGREPKQRKRKREPGEGRKGKSRKNRRGSGSDSDP
PKKRGRKKGEKGIGKREKARAAKAADEKLSAKQRAKIVSKETISTSESESDASRKSRSRS
RSGSGSRSGGSRSRSPPANKGRKRIMSASDSDRSKSRSRSRSKSKSRSRSGSAKSRSRSK
SKSRSKSRSRSKGRSRSKSGSRSKSRSRSKSRSRSKSRSRSKSRSRSKSVSRSRSRSKSR
SRSKSKSVSRSRSRSRSKSGSRSRSGSRAGSRASRSRSRSGSRSRSGSRNSRPDTPVSRK
SVSASEDEA
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgtcgctcgaaatcccgttgatgagcaccgatgaggtgattgaattagatccagagcag
ttaccttctggagatgaagtgcttagtatattacaacaagaaaaatcgcagcttaatgtc
tggatcaatgttgctcttgcatattacaaacaaaagaagatcgatgacttcctcaagata
ctggaggcctcccgtacggaggccaacattgactacagagacttcgaaagagaccaaatg
cgagccctcgacatgctggccgcatactatgtgcaagaggccaataaagaaaaggtcaaa
gacaagaaaaaagagttgtttactaaagctactctgttatacacaatggccgataaaatc
atcatgtatgatcaaaaccatctcctcggtcgtgcctacttctgtctcctcgaaggcgat
aaaatggagcaagcagatgcccaattcaactttgtactgaatcagtctcccaacaatgtg
ccctcattactgggaaaagcttgtattgcattcaatcgaaaagactatagaggagcatta
gcgttttacaagaaagcgctgagaacgaacccagatagcccagcggctttacgcttgggt
atgggccattgtttcatgaagctgaataatcaggaaaaagctaggatggcatttgaaagg
gctttacaactagacccacaatgtgtaggcgcattggttggcttatctatcctcaaacta
aatcttcaagagagtgagtcgaacaaaatggctgtgatcatgttgtcaaaggcctatgcc
attgaccccaaaaatcctatggttttgaaccatttggctaatcacttctttttcaaaaag
gactacagcaaggtgcaacacttggccttacacgcgttccacaacactgagaacgaagca
atgcgggcggagagttgtcaccacctcgctcgagccttccatgcacaaggagactgtgat
caggccttccagtattactatcaggctactcagttcgcgccaccgaactttgtgttgcca
cattatgggctgggacagatgtatatttatagaggagatacggagaatgcagcccagtgc
ttcgaaaaagtattaaaagttcaaccaggcaactatgaaactatgaagattttaggatct
ctctacgccaactcaccttcacaatctaagcgggatatcgctcgccaacatttaaagaaa
gttacagaacagttcccagacgatgtggaagcttggatagagttggctcaaatattggaa
caaaatgatttgcagggttcgctaaacgcttatagcacagcaatgaagattctcaaagag
aaagtgaatgcagatattccggcagaaatattgaacaatgttgcagccttgcattacaga
ctaggaaacttgaatgaagccaagaattatttggaggaagctctagaaagggagaaagca
gacgccgaaacattggacgctcagtactacaactcaatagcagtcacaactatgtacaat
ttagcgcggttgaacgaagcattatgcgtctataacaaagcggagaaattgtacaaggac
atattgaaggaacatcctaattatattgactgttatttaaggttaggctgtatggctcgc
gacaagggtcaaatctacgaagcctctgattggttcaaggaagctctgaaagtgaacacg
gaacatcccgacacgtggtcgttgctaggcaacttgcatttagctcaacaagaatggggg
cccggacagaagaaatttgaaagaatcctgcaaaattctagcacgtctaatgatgcttat
tcgttgattgctcttggtaacgtatggctacaaacactacaccagccgtgccgagagaaa
gacagggagaagcgtcaccaagagcgagctctcgcgatgtataagcaagtgctcaagaac
gatcctaagaacatatgggcggcaaacggcattggatgtgtgttggctcataagggttgc
gtgaacgaggctcgcgatatattcgcgcaggtgcgggaggcgacggccgacttccccgac
gtgtggatgaacatcgcacacatttacgtcgaacagaaacagtacattaacgctatacag
atgtacgagaactgcgtccgcaaattccgcatgcaccacgacgtagaatggctgacatgg
gtcgctcgggcgcaaacactcgccggccgcgccggggctgcccgagcctccctacttaga
gcccgacgagtagcacctcacgacgcagcactcgcttacaacaccgcactaacactacgt
cgccgagccgccctcgtactcaaagacgatagatcagacttacgtttggttttacgtgcc
gttcatgagttacacgtgtcgcatcgacacttctctcgcttggcgggagcgacgccggat
gcgaccgcccggcccgacgcctcggcagctactgccgaagctaggacctgtgctgatctg
ctgtctcaagcgcagtggcatgtggcgagggcgaggaggcagcatgatgaggaggtcacg
ctgagggatcggcagagggaacagagagaggctttcaggaggcaacaggaagaagaacgc
aaacgtcgcgaagaagaacaacaaaaaagcacagtggagatgttacaaaaacgtcaagag
tacaaggagaagaccaagaacgctctactgttcgccgacatgcccactgagaacaagtcc
aagggcggccgcggcaggaggcgcgatgaatatgtgtccgactccccgggcagcggcagt
gaaggacctagggaggacggtcgcgagccgaaacaacgcaaacgcaaacgggagccgggc
gagggccggaaaggcaagtcgcgcaagaacagacgcggctccggcagcgatagtgatccg
cctaagaaacgaggcaggaagaagggtgaaaaaggcatcggcaagcgcgaaaaagcgcga
gctgcgaaagcggctgacgagaaacttagcgcgaaacaacgggcgaagatcgtctctaaa
gaaaccatatcgacttccgaatccgaatcggatgcgtctcggaagtcgcgcagcagaagt
cgcagcggcagtggaagtcgcagtggaggaagtaggagtagaagtccgcccgccaataag
ggacgtaaaaggattatgtctgcgtctgatagtgatagatctaaaagtcgttcaaggtca
aggtcgaagtccaaatcccgcagtcgatcaggatctgccaagagtcgctctcggtccaaa
agcaagtcacgttcgaaaagccgttctaggtccaaaggacggtctaggtctaagagtggg
tcaaggtcaaaaagccgttcaaggtcgaagagtaggtcccgttcaaagagccgatcccgc
tctaaaagtcgctccagatctaaaagtgtttcaagatctcgatccaggtcaaagagcaga
tcccgttcgaaatccaaaagcgtatcaagatctagatcccgttcgagatctaaaagcgga
tctcgtagccgatcaggttctcgcgccggatctcgcgcgtcccgatctcgttcccgctct
ggttccagatctagatccggttccaggaattctagaccagacacgccggtttctagaaaa
tccgtttccgctagtgaagacgaagcttag

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