KEGG   Helicoverpa armigera (cotton bollworm): 110378761
Entry
110378761         CDS       T05609                                 
Name
(RefSeq) intraflagellar transport protein 80 homolog
  KO
K19678  intraflagellar transport protein 80
Organism
haw  Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:haw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:haw03037]
    110378761
Cilium and associated proteins [BR:haw03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   110378761
SSDB
Motif
Pfam: Beta-prop_IFT80_2nd Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_WDR19_1st ANAPC4_WD40 EIF3I WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N eIF2A TPR_IFT80_172 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_TEP1_2nd WDR90_beta-prop_4th PEP5_VPS11_N NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_IP5PC_F WDR54
Other DBs
NCBI-GeneID: 110378761
NCBI-ProteinID: XP_021193826
LinkDB
Position
6:join(3517174..3517268,3517589..3517756,3517996..3518102,3518379..3518557,3518798..3518887,3518985..3519122,3519213..3519337,3519410..3519658,3519880..3520040,3520212..3520421,3520953..3521097,3521268..3521421,3521526..3521666,3521786..3521818)
AA seq 664 aa
MKLKISTFKEPKHTGVVVCVNWNNTEDVFSCGDDHKLLKWNLVNSECIVVTTFPDDFYPN
DMHLFPKINVGGNKHQHDVILISTADGKFHIVNHNGRIEKSVNAHQGACLIAQWSPDGAG
LLTAGEDGFVKVWSRNGLLRSTIVQSDVPCFSAVWSPDSSAILHTKGNSLVIKQLNSSNK
ITKWKAHEGLILCIAWNANNNLILSGSEDGYSKIWDTFGQQISVSVKHDQPITSVSWSPA
GDMFVIGSYNLIRLCNSNGWSHCLDRPTTGSIYNVAWSSDGTQLAAACANGHVLFAHIID
REYTWKNYACNQIGRKVIAIRDIITDQSDQLDYPDRVIQIALGFNHLVIATVKQCFIHKL
TSWNTPVTFDLKEGTISMILLAERCICIVERAGLSVYSYMGRLLASPRWGARPESLGRAA
VSLGPDALAAIDQGDRKLIHVFDLPTGLIVRSSADNTVTKLTHKMTVSSIALSQTGPINE
RQLALLDYNRDLYVVTVKDSKPKFVKLGSQILSICWSYETELLVGLRASSVVAWCCPRAA
MQPDLLALTTVSKDVVDLGRNPTILSVEDGVAHICRGNGSILHLSIAAFPEKLLKHVVAN
MWQQALQLCRTVEDETLWACLAVLAWQHHQLPVAEEAFALIRQYHQVCYIQHLRSNIPEK
LTNN
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgaaattaaaaatatctacattcaaagaacctaaacacactggtgtcgtcgtgtgtgtg
aattggaataacactgaagatgtattttcttgtggggacgaccacaaactcctaaaatgg
aacttagtaaacagcgaatgcatagttgttacaacattccctgatgacttctatccgaat
gacatgcatttgtttcccaaaatcaatgttggcgggaacaagcaccaacatgacgtgatt
ctcatttcgacagcagatggcaagttccacatcgtcaatcacaatggccgtatagagaaa
tcagtgaatgctcatcagggtgcttgtctcattgcacaatggagtcctgatggagccgga
cttctgacagctggagaagacggttttgtaaaggtgtggtctcgcaacggtctacttcga
tcaactatcgtgcaatccgacgtgccatgtttcagcgccgtatggagtccagacagcagc
gctatcttgcatacaaaaggaaattctctagttataaagcaattgaattccagtaataaa
attaccaaatggaaagcacacgaagggctcatcctgtgtatcgcttggaatgccaataac
aatttgattctttctggatctgaagatggatattctaagatttgggacacgtttggccag
caaatatcggtgagcgtgaaacatgaccagcccattacgagtgtcagctggtctcccgct
ggggatatgttcgtcattggcagctacaacctcatacgactttgcaattctaatgggtgg
tctcactgccttgatcgtccaacaacaggcagcatatacaatgtagcatggtcttctgac
ggcacacaattagcagccgcttgtgccaatggacatgttttattcgctcatattattgat
cgagagtacacctggaagaattacgcctgcaaccaaatagggcgcaaagtaattgccata
agggacataattactgaccaaagtgaccaactggactatccagatagagtcatacagatt
gctttgggcttcaaccatctggtcatagcgacggtgaagcaatgttttattcacaagctt
acgtcctggaatactccagtgacgttcgatctcaaggaaggcactatcagcatgatattg
ctggctgaaagatgcatatgcatagtagaaagagctggtctttcagtatatagctacatg
ggtcgtctactagccagtccccgttggggcgccagacctgaatctttgggccgagctgcc
gtgtctttgggaccagatgctttggctgccattgaccagggggatagaaaattgatccat
gtcttcgaccttccaacgggcctgatagtccgaagctcagcagataacacagtaaccaaa
ctgacacacaaaatgactgtctctagcatcgcactcagccaaacagggcctatcaatgag
agacagctggcccttttggactacaatagagatctgtatgtcgttactgtgaaggatagc
aagccaaagttcgttaaattaggatcccaaatcctcagcatatgctggagttacgaaaca
gagttgctggtggggttacgcgccagttctgtggtagcatggtgttgtccccgagcagct
atgcaaccagacctgctggctctcaccaccgtcagtaaagatgtcgtagaccttggcagg
aatccgacaatcctaagcgttgaagacggagtagcacacatatgccgtggcaatgggtcc
attctgcatctctcgattgccgcattccctgaaaagttactcaaacatgtagttgcaaat
atgtggcaacaagcactgcagctgtgccgcaccgttgaggacgaaactctttgggcgtgc
ttagcagttctggcttggcagcaccatcaactaccagtagctgaagaagcgtttgctttg
atacgacagtatcatcaagtctgctatattcaacatcttagaagtaacataccagagaag
ctgacaaataattag

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