Helicoverpa armigera (cotton bollworm): 110378824
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Entry
110378824 CDS
T05609
Symbol
pit
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haw03041
]
110378824 (pit)
03009 Ribosome biogenesis [BR:
haw03009
]
110378824 (pit)
Enzymes [BR:
haw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110378824 (pit)
Spliceosome [BR:
haw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110378824 (pit)
Ribosome biogenesis [BR:
haw03009
]
Eukaryotic type
90S particles
Helicases
110378824 (pit)
Pre-60S particles
110378824 (pit)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_30
DUF8305
Peptidase_M78
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
110378824
NCBI-ProteinID:
XP_021193906
LinkDB
All DBs
Position
14:complement(join(6520796..6521125,6521394..6521564,6524082..6524234,6525289..6525448,6525846..6525987,6528155..6528319,6528583..6528732,6529144..6529404,6529826..6529969,6530225..6530296,6530483..6530588))
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AA seq
617 aa
AA seq
DB search
MPTPDKILMRKIKKREKKKLKLINKKTNGVSEDNAEAENNTEIEVKKRPREDSENAVPKK
KKKKVKEVKPEPVAVKEESDSEGSDSDADEDNKADDDEENETNTESQLPGSSLCLGILSD
QKFSALEGKVCESTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAARTGSGKTLAFLIP
AIDLIYKLKFKPRNGTGVIVLSPTRELAMQTFGVLMELMKYHHHTYGLVMGGANRSTEAQ
KLSKGINILVATPGRLLDHLQNTPDFLYKNLQCLVIDEADRILEIGFEEEVKQIIKLLPK
RRQTMLFSATQTKKTEALTALAVKHEPIYVGVDDHREQATVDSLEQGYIVCPSEKRMMVL
FTFLKKNRKKKVMVFFSTCMSVKYHHELFNYIDLPVMSIHGKQQQTKRTTTFFQFCNAES
GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGLGTSGHALLFLRPEELG
FLRFLKQSRVTLNEFEFSWNKIADIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDSHHLK
TIFDIDTIDLAKVSKSFGFTVPPAVELKVANKGPPQKRKGGGGYGYFKSLNAPTNFKQKA
EKTKIYRQKGNNRKSVG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcctactccagacaagattttgatgaggaaaataaaaaagcgggagaagaaaaagtta
aagctaattaacaagaagaccaatggagtctctgaagacaatgcagaagctgagaataac
actgagatagaagtcaagaaaagaccacgtgaggacagtgaaaatgcagtacccaaaaaa
aagaaaaagaaagtaaaggaagtaaaaccagaaccagtggcagtgaaagaagagagtgat
tcggaagggagtgactctgatgcagacgaggacaacaaagcagatgatgatgaggaaaat
gaaacaaacacagagagtcaattgcccggttccagcttatgccttggcatcctatcagac
caaaagttcagcgctctagaaggaaaagtgtgtgaatcaacattgatgggaatcaaagac
atgggtttcaccaccatgactgaaattcaggctaaagctattcccccacttcttgaagga
agggatcttgtgggtgctgctagaactggttctggaaaaaccctggccttcctaatacct
gctattgatcttatctataaactgaaattcaagcctagaaatggtactggtgtgatagtc
ctgtccccaactagggaattggctatgcaaacatttggtgttttgatggagttgatgaaa
tatcatcatcatacttatggtttggtgatgggaggagctaatagaagtactgaagcacaa
aagctgtctaaaggtattaatatactagtggcaacaccaggtcgtctactggatcacttg
caaaacacacccgactttttgtacaaaaacttgcaatgtcttgtcattgatgaagctgac
aggatattagagattggtttcgaagaagaagtcaaacagatcatcaaactactgcccaaa
cgtcgtcaaacaatgttgttcagtgccacccagactaagaaaactgaagctttgacagcc
ctcgcggtaaaacacgaaccaatctacgtaggagttgatgatcacagggaacaagctacc
gttgactctctagaacaaggatacatagtatgcccatcagaaaagcgtatgatggttcta
ttcacattcctaaagaagaatagaaagaaaaaggtgatggtgttcttctccacctgtatg
tctgtgaagtatcaccatgagctcttcaactacatcgatttacctgtcatgtctatacac
ggaaaacaacaacaaacaaagcgtacgacgaccttcttccaattctgtaacgcggagtca
ggtatactgttgtgcacggatgtcgcggccagaggtctggatataccagccgttgattgg
atcgtacaatacgaccctccagatgatcctaaggagtacattcaccgtgtaggccgtaca
gctcgtggtttgggaacgagcggacacgcgttgctcttcctccgccctgaagaacttggc
ttcctaaggtttttgaagcaatccagagtaacgctcaacgagtttgaattctcatggaac
aagattgccgacatacaattgcagctggagaaattaatatcgagaaactacttcctgaac
caatcagctaaagaagcgttcaagagttatttgcgagcttacgactcgcatcatctcaag
accatattcgatatcgatacaatcgatttggcaaaggtatcgaaatcattcggcttcacc
gttccccccgctgttgaactcaaagtggccaacaaaggacctcctcaaaagaggaaagga
ggtggaggatacggatatttcaagtctctgaacgccccaaccaacttcaaacaaaaagct
gagaagacgaaaatctacaggcaaaaaggaaacaacagaaaaagtgtaggctaa
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