Helicoverpa armigera (cotton bollworm): 110378826
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Entry
110378826 CDS
T05609
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haw03041
]
110378826
03009 Ribosome biogenesis [BR:
haw03009
]
110378826
Enzymes [BR:
haw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110378826
Spliceosome [BR:
haw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110378826
Ribosome biogenesis [BR:
haw03009
]
Eukaryotic type
90S particles
Helicases
110378826
Pre-60S particles
110378826
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Cas3-like_C_2
Nse5
CMS1
Motif
Other DBs
NCBI-GeneID:
110378826
NCBI-ProteinID:
XP_021193908
LinkDB
All DBs
Position
14:join(6516052..6516301,6516543..6516692,6516929..6517093,6517332..6517470,6517658..6517820,6518185..6518337,6518776..6518943,6519506..6519683,6520563..6520579)
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AA seq
460 aa
AA seq
DB search
MDVDEIISQSSFSMLKGKVDGRILKALTSMGLVKPTRIQAEVLPHLLQGKDLIGAAKTGS
GKTLAFLIPVVDTLIKLGWSAKSGTGCVILSPTRELALQTFDVLKKLLVQINLSHCLIVG
GEKRAKDVIKLKKGANIIVSTPGRLLDHLQGTENFHCDKLKCLVLDEADKLLEAGFKKHI
TGIINLLPTKRQTVLFSATMGENVKNLASLAMRTDPVIISVTDNKMSTVSGLQQGYYICP
VEKRISWLYKMLKKSKKLKVMVFFSSCKSVDFHYEFFGEHCKANVLSIHGQQSQARRKEA
YHSFIEAQNGVLFCTDVAARGLDIPSVDWIVQYDPPSDPKEYIHRVGRTARGLNNKGNAV
ILLRPEEKNFIEFLQKEKVFLDKYSFGDPPDEVQEMLENLIASNGVMKTLARKAYLSFLR
CYKTHPLKKIFDINSLDLKLAAKAFGFLEQPHVDFLTKKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatgaaataatttcacagtccagtttttcgatgttaaaaggaaaggttgac
ggaaggatattaaaggcattaacctcaatgggtctggtgaagccaacacgaattcaagct
gaggttttgccacatttactccagggaaaagacttgataggtgcagctaaaactgggagc
ggaaagactttagcgtttcttataccagttgttgataccttgatcaagttgggctggtct
gccaagtcaggtactggctgtgtgatattgtcgccaacaagagagttggctttgcagact
tttgatgtattaaagaaacttctagttcaaattaatttgtcccattgccttattgtggga
ggtgaaaagagggccaaagacgtaataaaactgaaaaaaggtgcaaatatcatagtgagt
acaccaggccgattgttagaccatttgcaaggcactgaaaattttcactgcgataaactg
aagtgcttagtgctggacgaggctgataaactactggaagctggctttaagaagcacatt
actggaattattaacttgttgccaacaaaaaggcaaacagtactcttcagtgcaactatg
ggcgaaaatgtcaagaatctagctagtttagcaatgagaactgatccagttataatatct
gtaactgataacaaaatgtccacagtctcgggactccaacaaggatactacatatgcccg
gtagagaaaagaatatcatggttgtacaaaatgttgaaaaaaagtaagaaactaaaagtc
atggtgtttttctcatcatgtaaatctgtagattttcactatgaatttttcggagaacat
tgtaaagctaatgttttgagtatacatggtcagcaaagtcaagcgaggaggaaagaggca
tatcatagttttattgaggcgcaaaacggcgtcttgttttgtactgacgtcgcagcccgg
ggtttggatattcccagcgttgattggattgtgcagtatgacccgccgtccgatccaaag
gagtacattcatcgagttggtcgcacggctaggggactcaacaataaagggaatgcagtt
atattgttgaggcccgaagagaagaactttattgagtttctgcagaaagaaaaggtgttt
ttagataaatactcttttggtgatcctcctgatgaggttcaagaaatgctagaaaatctc
atagccagcaatggtgtaatgaagaccttagcaagaaaggcatacctttcgtttctaaga
tgctataaaacgcatccattgaaaaagatatttgatatcaattcattggatttgaaatta
gcagcgaaagcctttggatttttggagcagccgcacgttgattttctaacgaaaaagaaa
tga
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