Helicoverpa armigera (cotton bollworm): 110378958
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Entry
110378958 CDS
T05609
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
haw
Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110378958
03041 Spliceosome [BR:
haw03041
]
110378958
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110378958
Spliceosome [BR:
haw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110378958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
110378958
NCBI-ProteinID:
XP_021194098
LinkDB
All DBs
Position
31:join(1105313..1105514,1123836..1123895,1137772..1137859,1139528..1139603,1144534..1144636,1147228..1147408,1149321..1149450,1149789..1149964,1151108..1151279,1151775..1151816)
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AA seq
409 aa
AA seq
DB search
MLTMSALMMPAATMTTMTNAGPIPVAAATKLEPKLLQLPHPALVPQMAQQPQPQPHHHQH
PHNNNKVGWEDMRRSGHAWNQHGLSVQEHYHIFVGDLSPEIETQSLRDAFAPFGEISDCR
VVRDPQTLKSKGYGFVSFLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSK
PLTFDEVYNQSSPTNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFST
KESATHAIVAVHNTDVNGQPVKCSWGKESGDPNNAQAQGQIPTAYSPFGATYTGGVPPTS
YWYNTYPQQLGGFLQGVQGVQGYTYAGQAFAGYQQQYMGKEYQWANTTACSSMGGVQLPW
ALGAGVGGVGSVGGVAAMSQPPQVLHYPVQHFQVQPIGEDEWLAPSLLV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgatgtcagctctcatgatgccagcagctactatgacgactatgactaacgcc
ggtcccatacctgtggctgctgcgacgaagttagaaccgaaattgttgcaactcccacac
ccagcgctggtgccgcaaatggctcagcaaccacaaccacagcctcatcaccatcagcat
ccgcataataataataaagtcggatgggaggatatgcgtcgatccggccatgcatggaat
cagcatggattatcagtccaagaacattatcacattttcgtgggagacctgagtcctgag
atcgagacgcagagcctccgggatgccttcgcgcctttcggagaaatatctgactgtcgc
gtggttcgtgatcctcagacgctgaaatccaaaggatatggattcgtctcatttttgaaa
aaatcggaggcagaatcggctataacttcaatgaacggacagtggctgggctcccggtcg
atccgcaccaactgggcgactaggaaaccaccagcgcctaagaatgagttaaactcaaaa
ccgctgaccttcgacgaggtctacaaccagagctctccgacgaactgcacggtctattgc
ggcggtctcaccactggtctgacggaggagctgatgcagaagaccttccaaccattcggg
actatccaggagatccgcgtcttcaaggataagggatatgcttttattagattctccacc
aaggagtcggcaacccacgcgatcgttgctgtccacaatacggacgtgaacggccagccc
gtcaagtgttcctggggcaaggagtcaggggaccccaataatgcacaggctcaaggacaa
atcccaacagcctacagtcctttcggcgcgacctacaccgggggtgttcccccaacctct
tactggtacaacacctaccctcaacaactagggggcttcctccaaggcgtccagggggtg
caaggatacacgtatgccggtcaggctttcgctggctatcagcagcagtatatgggtaag
gagtaccagtgggctaacacaactgcctgttccagtatggggggcgtccagctaccctgg
gccctgggcgcgggggtcggaggcgtgggctctgtggggggggtcgcagccatgtctcaa
ccccctcaggtgcttcattatccggtgcagcatttccaagtgcagcctattggtgaagac
gagtggctggctccgagcctcctggtgtga
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