Helicoverpa armigera (cotton bollworm): 110379369
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Entry
110379369 CDS
T05609
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X3
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110379369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haw03021
]
110379369
03036 Chromosome and associated proteins [BR:
haw03036
]
110379369
Transcription machinery [BR:
haw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110379369
Coactivators
SAGA/TFTC/STAGA complex
110379369
Chromosome and associated proteins [BR:
haw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110379369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
110379369
NCBI-ProteinID:
XP_021194691
EnsemblRapid:
LOC110379369
LinkDB
All DBs
Position
1:complement(join(10847698..10847826,10848330..10848668,10849201..10849396,10849478..10849824,10852572..10852712,10853285..10853494,10855339..10855497,10856066..10856230,10858112..10858957))
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AA seq
843 aa
AA seq
DB search
MASAEFLEQALSTNVDENAVNAIVGSLENQLVTPVPSQSSHTSFVNVIPSQNCNITSNAG
SIISGQKYVTDQINSGGIVNSIHSNIVSNSSASFNNVQASTQPTFTSLSLSGGAPLSNET
LKVIYSQAQHLSNPHSSVTLPVQSLASGPSQSQILHAVSTGGVLPQQGNKTIAMQPPLVI
KQGTNTGQVGMQPGMVTVPMTVNSSMPASIPNVMTLNKPGGQNVVVTTQNLGSAQPTIIP
NVQILNMRPGAPAVAAQKSVATVSPRVVIGTPQVVGTRATAPITLQTLQSLQPGQQGHLL
LKTENGQYQLLRVGHAPAASTLTAPQAQTIRLSTVPAHPGVATVSTSVAAPGPIPGQMPA
PPIAAPVVASAPSVTVSTTPPQQPSTTTHIKPSDNTKEKCRNFLANLLDLSSKEPPSVEM
NVRNLIQELIDAQVEPEEFCDRLERLLNASPQPCLIGFLKKSLPLLRQSLVTKELVIEGI
NPPAPHVAFSTIPAPTQPVIATSNIQMKPTQKPGGSIAVLQNIPLHTKINVNKVGKAMTV
NSKANFPRSSVPSAALSTVLTPGKSLLKDKEKKSSGQFSQPFVDDKMAGDDDINDVAAMG
GVNLAEESQRILGSTEMIGTQIRSCKEEYLVPTSLMQARIKAITSKHGMEESPPEVANII
SHAVQERLKTIVEKLATIAQHRIDLIIKTDNRYEVTQDVKGQLKFLEELDRVDKKRREDS
EREMLLRAAKSRSKNEDPEQAKLKAKAKEMQRAELEELRQREANLTALQAIGPRKKARLD
MPGGSGDSISNGSGHNSSSGVSGRSQMALRTRLKRINLRDMICLMEQERDTSRSLMLYKS
YLK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagccgagtttttagagcaagctttgtccacaaacgttgatgagaacgccgtt
aacgcgattgtagggtcattagaaaatcagttagtcacgcccgttccatcacaatcctct
cataccagtttcgtaaatgttataccgtctcaaaattgtaatataacttcaaacgcgggc
tctattataagtggacaaaaatatgttacggaccaaataaattctggtggtatagtgaac
agtattcattctaatattgtatcgaactcaagtgcatcgtttaataatgtgcaagcatca
acacaaccaacatttacatctctttcattgagtggtggtgctcctctttccaatgagaca
ttgaaggtgatatactcacaagcacaacacctgagcaaccctcacagcagcgtgacgtta
ccagttcagtctttggcaagcgggccatcgcagagccagatattacacgcagtgtcgaca
ggcggcgtgctaccccagcaaggcaacaaaactatcgccatgcagcctccactcgtgata
aagcagggcacaaatactggccaagtgggtatgcagcctggaatggtgactgtcccaatg
actgtgaactctagcatgcctgcttcaatacctaatgtgatgacactgaacaagcctgga
gggcagaacgttgtagtgaccacacagaatctaggctccgcgcagcctactatcatcccc
aatgtccaaatattaaacatgagacctggagcgcccgcagtggctgctcagaagtcagta
gcgacagtatcacccagagtggtgattggtacgcctcaagttgttggtacgagagcaact
gctccaataacgctgcaaactctgcagagtcttcaaccggggcagcagggtcatttgttg
ttaaagactgagaatggtcaataccagctgctgagggtgggccacgcgcccgcggccagc
actctcacggcgccgcaggctcagaccatccggctgtcgaccgtgccggcacaccctggc
gtggccacagtgtccacaagcgtggcggcacctggccccattccgggacagatgccggcg
ccgccgattgctgcgcctgtggtcgcatcggcgccaagtgttacggtgtctacaactccg
ccgcagcagcccagtaccaccacacatattaaaccgtcagacaataccaaagagaaatgt
cggaacttcctagcaaatcttctggacttgtccagcaaggagccaccatccgtggagatg
aatgtgaggaacctgatccaggagctgattgatgcccaggtcgagcccgaggagttctgt
gatagacttgaacgtctactcaacgccagcccacaaccatgcctcattggatttctgaag
aaaagtttgccgctgctccgtcagtctcttgtgacgaaggagttggtgatcgaaggcatc
aaccctccagcgccgcacgtggccttctcaaccataccagcaccaactcaacccgtcatc
gctacctccaacatccagatgaagccgacccagaagcctggcggctctatagccgtgctg
cagaacattcctctccatacgaagatcaatgtgaacaaggtgggcaaggcgatgacagtg
aacagcaaggccaacttcccgcgctcgtctgtgccctccgccgcgctctccaccgtcctc
acccccggcaaatccttgctcaaagacaaagagaagaagtcttcgggacaattctcgcaa
ccgtttgttgacgacaagatggcgggcgacgatgacatcaacgatgtggctgctatggga
ggcgtcaacttggcagaggaatctcagaggatcctcggctccacggaaatgatcgggacc
cagattcggtcatgtaaggaggaatatttagtaccgacaagcttgatgcaggcgcgaatt
aaagcgataacttcaaagcacggcatggaggaatcgccaccagaagtagccaacatcatc
agccatgcagtacaagaaaggctcaagaccattgtggagaaacttgccacgatcgcacaa
cacagaattgatttaataataaagactgacaaccgctatgaagtgacacaagacgtgaaa
ggccagctcaaattcctagaagaactggatcgtgtcgataagaaaagacgcgaggattct
gagagagaaatgctattacgagctgcaaagtctaggtctaaaaatgaggacccggagcag
gccaaactgaaggccaaagcgaaagagatgcagagagctgagttggaagagcttaggcag
cgtgaggctaacttgacggcgctgcaggccatcgggcctagaaagaaggcgaggctcgac
atgcccggaggatcaggagactccatttctaacggctccggacacaatagtagctcagga
gtctctgggcgcagtcagatggctctgcgaacgaggctgaagcgcatcaaccttcgcgac
atgatctgcctgatggaacaggaacgagacacgagtcgctccctcatgctgtacaagagc
tacctcaaatag
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