KEGG   Helicoverpa armigera (cotton bollworm): 110380087
Entry
110380087         CDS       T05609                                 
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110380087
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:haw03400]
    110380087
DNA repair and recombination proteins [BR:haw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110380087
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II
Other DBs
NCBI-GeneID: 110380087
NCBI-ProteinID: XP_049703684
LinkDB
Position
7:complement(join(6023278..6023508,6023987..6024212,6024529..6024620,6025317..6025549,6026257..6026478,6026907..6027091,6027752..6027926,6028736..6028895,6029645..6029852,6030781..6030939,6032148..6032383,6032670..6032822,6033745..6033936,6035823..6036017,6051654..6051703,6052614..6052650))
AA seq 917 aa
MSSLQPIQALSLDSVQQQAFIKYFHSLPEKPATTVRIFDRNDYYSVHGADASTAAREVFS
TVANIKKMGLEPNKLDYLVLSKGNFEILIKKLLLVRRYRVEIYVAEGSVKGSDWSLKYKG
SPGYLSQLEEILGEGLGASDDTTPCLMAVHIKTDAVTKGRLLGVACVTAGDYQMSVTEFT
DDDLLTELETITVQMAPSECLVPISEHDDYKALKKVMERTNVTVTKLKKSEFSTEGLIQD
LNRLLKFKENQQQDANAFPETSKEVAMTCLAAAIKYSALLNDSTNFGRFRLSTIQADCFL
HLDSAALSALNVFPELGDTSHAPSRSLYGLLDRCRTQQGKRLLAQWLRQPLRDINLINER
LDIVELLKSNSQLRLQLHEDHLRRIPDLQALARRLTRKKANLQDCYRIYQAINRLPSLLR
CLAEAENPTVHSSITEPISELNEDLGKFLEMIETTVDMEAVDRGDFLVKPSFDEQLQSLS
EQLEQMQSSADKELNKAAKDLGLDAGKTIKLESNPQNGFCLRVTKREEQTLRGNKKYTII
DAVKGGVRFKTKALENITEEYTTIKSNYEREQDKVVAEIVGIAAGYSECLFCLSHILSRL
DVLVSFSVAAASAPHSAYIRPTITEDLNELVLKELRHPCLEVAEGVSYIPNDVVFKRGTG
VMHIVTGANMGGKSTWMRSCGVAVVLAHAGCPIPASAAKIPRLKALAARIGASDAEAKGH
STFMREMIDTAAILRTATPDSLVLIDELGRGTSTYEGCGIAWAIAEELATKSQCFCLFAT
HYQELTRLASTHPGVIINSHAEASVVKGQLLLLHRIAPGPAMHSLGLHVAKLADLPDSII
EYAEAKQAQLEINLFDVEAAVQSEETTEGHKLIVDFLRKCKQIQESSPSDNSMMEEITKL
KQELLQTQNKYVESLMA
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgtcctcgctacagcctatccaggcattaagcttggattctgttcagcagcaggctttc
atcaaatattttcactctttaccagagaaacccgcgacaacagtgaggatttttgaccgc
aatgactactacagcgtccatggagctgacgcatcgaccgcagccagggaagtttttagc
actgttgccaacatcaagaagatgggccttgaacctaataagctcgactaccttgtactt
tccaaaggaaacttcgaaattcttatcaagaaacttttgttggtcaggcgttatagagta
gaaatatacgtagctgaaggttccgtgaaaggcagcgattggtcactgaaatacaaagga
tcgcctggctacttgtcacagttagaagaaattctgggcgagggattaggagcttccgac
gataccacaccctgtttgatggcagtacatatcaagaccgatgctgttacaaaaggccga
ctcctaggcgtagcttgcgtgacggccggtgactatcaaatgtcagtgactgagttcacc
gacgatgatttgctaacggagttggaaactatcacggttcagatggcgccttctgaatgc
cttgtgcctattagtgaacatgacgattacaaagcgttaaaaaaagtgatggaaagaaca
aacgtgactgtaactaaattgaaaaagagtgagttctcaactgaagggcttatacaagat
ctgaaccggctgctgaaattcaaagagaatcagcaacaagatgcgaatgcttttccagag
acaagcaaagaggttgccatgacctgcttagcagcagctattaaatactcggcactactc
aatgatagcaccaattttggaaggtttcgtctgtcaaccattcaagctgactgtttccta
cacttggactccgcagcattatcagctctcaacgtgtttcctgagctcggagacacatcg
catgcgccttctagaagtttgtacgggttgctcgacagatgccgcactcaacaggggaaa
cgtcttctagcccaatggctacgccaaccgctcagagacataaatctaattaacgaacgc
ttagacattgtcgagttactaaagtccaactcccaacttcgcttacaattgcacgaagac
catttaagacggatacctgacttgcaagccttggcaagaaggcttacaagaaagaaggcc
aacttacaagactgttatagaatatatcaggctatcaacagactgccatctttactgcgc
tgtttagccgaagcagagaacccaacagttcactcatcgatcactgaaccaatctcagag
ctgaatgaagacctcggcaagttcctagagatgatagaaactaccgttgacatggaagct
gttgacagaggagatttcctcgtaaagccatcgttcgacgagcaactacaaagcctaagt
gaacagttggaacaaatgcagtcttcagctgacaaagaattaaacaaggccgctaaagac
ctaggcctcgatgcaggcaagactatcaagttagagagtaacccacagaatggattctgt
ttgagagtaacaaagagagaagagcagacactacgtggaaacaagaaatataccataata
gatgctgtgaagggaggcgtgagattcaaaactaaagcgttagagaatatcactgaagaa
tataccacgatcaaaagtaattatgagcgggaacaagataaagtagttgctgagatagtt
ggtattgcagcgggctactcagaatgtttattctgtctatcacacatattgtctcggctc
gacgtgttagtatcgttctcagtggcggcggcttcagcgccacattcggcgtacatacga
cctactatcactgaagatcttaatgaattggtactgaaggaattaagacatccttgttta
gaagtcgctgaaggcgtctcttatatacctaatgatgttgtgtttaaaagaggaacaggc
gtaatgcacatagtaacaggcgctaacatgggcggcaagtccacgtggatgcgatcctgc
ggcgtcgccgtcgtgctcgcacatgccgggtgtcccatacccgcctcagcagcgaagata
cctagactgaaggctctggccgcacgtattggggcttctgatgccgaggctaagggacac
agcacgtttatgagggaaatgattgatactgctgctatactcaggacggcaacaccggac
tcgctggtcttgatcgatgagttgggacgaggaacttccacttatgaaggctgcggcata
gcttgggctattgctgaggaactagcaacaaaaagccaatgcttttgcctattcgcgacc
cactatcaagaattaacccggttagccagcacccacccgggcgtcatcatcaactctcac
gcggaagcctcggtcgtcaaaggtcagctgctgctgctgcatcgcatcgctcccggacca
gccatgcattccttaggactgcatgtcgcgaagctagctgatcttcctgattctattatt
gagtatgctgaagcgaaacaggcgcaacttgaaatcaacttgttcgacgtagaagcagct
gtccaatctgaagaaactacggagggtcacaaattaattgtagacttcttacgtaagtgt
aaacaaatacaagaaagttcgccatccgataactcgatgatggaggaaataacgaaacta
aaacaagaattgttgcaaactcaaaataaatacgtggaatctcttatggcataa

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