Helicoverpa armigera (cotton bollworm): 110381400
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Entry
110381400 CDS
T05609
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
haw
Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haw03000
]
110381400
03036 Chromosome and associated proteins [BR:
haw03036
]
110381400
Transcription factors [BR:
haw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110381400
Chromosome and associated proteins [BR:
haw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110381400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
110381400
NCBI-ProteinID:
XP_021197398
LinkDB
All DBs
Position
1:join(1588598..1588667,1588852..1588985,1589500..1589661,1591367..1591545,1592099..1592268,1592810..1592946,1593257..1593407,1593837..1594003,1594249..1594385,1594904..1595141,1596758..1596962,1598342..1598475,1600938..1601000)
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AA seq
648 aa
AA seq
DB search
MAPPDKKDSTKQAIIPYTTAVITVAGAEDEADSGVAYFVDEDGRYYYQPTVEGQEFVMNN
QTTSQDTEQGTQESDTMLTDQEAEGYQTVTLVPSETNGEVSYVLVVQEENKAMVNIDLKV
DQSEAGEKGNDDVYNFEEEEAGEEASEEEDDAPEGRPKPQKKSKHTRLNFQCNFCSYTSH
RRYLLLRHMKSHSDERPHKCMVCERGFKTMASLQNHVNMHNGVKPHVCKYCNSPFTTSGE
LVRHVRYKHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKR
HLRTHTGEKPYKCENCNMCFTQSNSLKAHRLIHNVSDKPVYSCELCPAKCGRKTDLRIHV
QKLHTSDKPLRCRRCGKSFPDRYSCKVHNKTHEGEKCFKCEICPYASTTLRHLKSHMLKH
TDEKPFLCDLCDQSFRQKQLLRRHQNLYHNPDYVPKPPKEKNHTCHECKRMFAHKGNLIR
HLAVHDPESGHQEQALALKIGRQRKVKFLDAEPSRDIRVVDPTNASEMMKLGLANNEMKR
GELVTVTDGDGQQYVVLEVIQLEDGTEQQVAVVAPDYMEEDAQEEGEEEEEEEEEEEGDA
EMSYGGKSSENDNNIKLEKEVDSCFGFDEEEEEPDDDDYTEKVVLRIV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcaccccctgataaaaaggacagcaccaaacaagctataattccgtatacaacagct
gttataacagttgctggggccgaggatgaagctgattccggtgtcgcttactttgtagat
gaagatggcaggtactactaccagcccacggttgagggccaagagtttgtgatgaacaac
cagactaccagccaggatactgagcagggaacacaagaatcagacacaatgttgactgat
caagaagcagagggctatcaaactgtgaccctcgtcccatcggagacaaatggagaagtc
agctatgtgctagtcgtgcaagaggagaataaagctatggtcaatattgatctcaaggtg
gaccagagcgaggccggtgagaaaggcaatgacgatgtgtacaactttgaggaggaagag
gctggagaagaggcttcggaggaagaagatgatgctcctgaaggaaggcccaagccacag
aagaagagcaagcacactaggttgaacttccagtgtaacttctgttcctatactagtcat
cgacggtacctgctccttcgtcacatgaagtcccattcggatgagcgtcctcacaagtgc
atggtgtgtgaacgcggcttcaagaccatggcttcccttcagaaccatgtgaacatgcac
aatggcgtcaagccgcatgtttgcaaatactgcaacagtccttttactacttctggcgag
ctggtgcgtcacgtccgctacaagcacacgcacgagaagcctcacaaatgtaccgaatgc
gactacgcctccgtcgagttgtctaagctgcgtcgccatgttcgctgtcacactggcgaa
agaccttaccagtgcccgcactgcacgtatgcatctcccgacacgttcaagctgaaacgt
catttgcgcactcacactggcgagaagccttacaagtgtgaaaattgtaatatgtgcttc
acgcaatcgaactctctgaaagcgcatcgcctgatacacaacgtgtcggacaagccagtg
tactcctgcgagctgtgcccggccaagtgcgggcgtaagacggacttgcgcatccacgtg
cagaaactgcacacttcggacaagccgctccggtgccgccgctgcgggaaatccttcccc
gatcgttattcctgcaaagtgcataataagacccatgagggcgagaaatgcttcaagtgt
gagatctgcccgtacgcttcgacgactctgcgtcacttgaagtcacacatgctgaagcac
accgatgagaagccgttcctctgtgatctgtgcgatcagtccttcaggcagaagcaactg
ctccgccgtcaccagaatctgtaccataatcccgactacgtgccgaagccgcccaaagag
aagaatcatacttgccacgagtgcaaacgcatgttcgcgcacaagggtaacctgatccgt
cacttggctgtccacgacccggagtccggtcaccaggagcaggccctcgccctcaagatc
gggaggcagaggaaagtcaagttcctcgatgcggagcctagtagggatatacgtgtggtg
gacccgaccaatgcatcggagatgatgaagctcggcctcgccaacaacgagatgaagaga
ggcgagctggtcaccgtgacggacggcgacggacagcagtacgtcgtgctggaggtcatc
caactggaggacggcaccgagcagcaagtcgcggttgttgcacctgattacatggaagag
gatgcgcaggaagagggtgaagaagaagaggaggaggaggaagaggaggaaggagacgca
gaaatgagctacggaggtaaaagctcagagaatgacaacaacatcaagctcgagaaggag
gtcgatagctgcttcggatttgatgaggaagaagaggaaccggatgacgatgattatact
gagaaagtagtattgcgtatagtttaa
DBGET
integrated database retrieval system
