Helicoverpa armigera (cotton bollworm): 110381577
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Entry
110381577 CDS
T05609
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110381577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haw03021
]
110381577
03019 Messenger RNA biogenesis [BR:
haw03019
]
110381577
Transcription machinery [BR:
haw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110381577
RNA polymerase I system
110381577
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
110381577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW7_SPT5
KOW5_SPT5
Spt5-NGN
KOW2_Spt5
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
110381577
NCBI-ProteinID:
XP_021197594
LinkDB
All DBs
Position
6:join(1280583..1280797,1282325..1282403,1282687..1282818,1283042..1285708,1285846..1285980)
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AA seq
1075 aa
AA seq
DB search
MSDSEGSNYSGSGSDAGSVASRRSRRSAASNRSVRSRSGSRSRSGSRSLSRTPSRGSRSR
SRSKSRSRSRSRSRSAGSDGSRNKDDEAKEASGDEEVEDEQEPEGEDLVDSEEYEEDEEE
ERLRKKRKKDSRYGGFIIDEAEVDDEVDEDDEWEEGAQEMGIVGNEVDEIGPTAREIEGR
RRGTNLWDSQKEEEIEEYLRNKYADESAALRHFGEGGEEMSDEITQQTLLPGIKDPNLWM
VKCRIGEEKATVLLLMRKFIAYQFSEEPFQIKSVVAPEGVKGYIYIEAYKQTHVKNIINN
VGTLRMGIWKQDMVPIKEMTDVLRVVKEQSGLKPKQWVRLKRGLYKDDIAQVDYVDLAQN
QVHLKLLPRIDYTRLRGALRTVQSESEAAKRKKKRRPAAKPFDPEAIRAIGGEVTSDGDF
LIFEGNRYSRKGFLYKNFTMSAILAEGVKPTLTELERFEEQPEGIDIELAAPAKDDPTSL
HSFSMGDNVEVCSGDLANLQARIIAIDGSMITVMPKHDALKDPLVFKPNELRKYFKQGDH
VKVLAGRYEGDTGLVVRVEPHRAVLVSDLTMHELEVLPRDLQLCSDMATGVDSLGHFQWG
DMVQLDPQTVGVIVRLEKENFHVLGMQGKVIECKPQALQKRRENRFTMALDSEQNTIQKR
DIVKVIDGPHAGRNGEIKHLYRNFAFLQSRMYLDNGGIFVCKTRHLQLAGGNKNSNASAG
LSLGFMSPRIQSPMHPSGRGGMTPRGRGGRGGRGGGVTRDRELIGQTIKITGGPYKGNVG
IVKDATGSTARVELHSACQTISVDRSHIAGAGNTSRDGASSFYTRTPGRTPTLGAQTPTY
RDTGIKTPMHGSATPIYDVGGRTPHYGSATPSHEGGRTPAHGAWDPAAAATPARPHDFEY
GALDDADAAYAGPFTPQTPGTMYGSDHTYSPYRPSPSPAGYTAGYPGTPSPGGYSPRSPY
AGADAAPDWHTTDLEVRVRAHEDSALAGQAGVLRGLSAGTCALYLPQEDRVVNVLADLLE
PVVPQSGDTVKVIAGEDREAVGQLISIENQEGVVKFGTDDIKIMQLRHLCKMSTA
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcggaaggtagtaattactcagggagtgggtctgacgcgggtagtgtggca
tcccgtcggtcacggaggagcgccgcatcgaatcgttcagtgcgttcgcgctcgggctcc
cggtcgagatctggcagccgtagcctgtcacggaccccgtccagaggctccagatcacgc
tctaggtctaagtctcgctcacgatcccgttctaggagtcgttcagcgggttccgatggt
agtcgcaacaaagatgatgaagcaaaagaggcatcgggtgatgaagaagttgaggatgaa
caagaaccagagggtgaggaccttgtggactcagaggaatatgaagaagacgaggaagaa
gaaagactgaggaagaagcgcaagaaggacagtcgctatggaggctttattattgatgaa
gctgaggtggatgacgaggttgacgaagatgatgagtgggaagagggagcacaagaaatg
ggtattgtgggcaatgaagttgatgagattggacctaccgcccgagaaatcgagggcagg
cgccgaggtaccaacctctgggactcacagaaagaagaggagattgaagaataccttagg
aacaaatatgctgatgagtcagcagccctcagacactttggcgagggtggcgaggaaatg
tcggatgaaatcacgcaacaaaccctgttgcctggtatcaaggaccccaacttatggatg
gtcaaatgcagaataggtgaagaaaaagccactgtcctactcctgatgcgaaagttcatt
gcctaccagttctcagaggaaccttttcaaatcaaatctgttgtggcaccagaaggtgtc
aaaggctatatttacattgaagcctacaagcagacacatgttaaaaatatcattaataat
gtaggtacacttagaatgggtatttggaagcaggacatggttcctatcaaagaaatgact
gatgtgctcagagtagtcaaggaacagtctgggttgaaaccaaagcagtgggtccggtta
aagagaggtctctacaaagatgatatagctcaagttgattatgtagatctagctcaaaat
caagtgcatttgaagttattacctagaatagactataccagactcagaggtgcactgaga
actgttcaaagtgaaagtgaggcagctaaacggaaaaagaagagacgccctgctgccaaa
ccttttgaccctgaagctatcagagctattggtggtgaagttacatctgatggtgatttc
ttaatatttgaaggcaatagatattcccgaaagggattcttatacaaaaacttcacaatg
tctgccatattggcagaaggtgtgaagcctacactgactgaattagaaaggtttgaggaa
caacctgaaggaattgatatagaattagcagcacctgccaaagatgatcctactagctta
cactcattctcaatgggtgacaatgtggaagtgtgctctggtgacttagcgaatttacaa
gctaggattatcgcgatagacgggtcgatgataaccgtgatgccgaagcacgacgcgctg
aaggacccgctggtgttcaagccgaacgagctgcgcaagtacttcaagcagggcgaccac
gtgaaggtgctggcggggcgctacgagggcgacaccgggctcgtcgtgcgcgtcgagccg
caccgcgccgtgctcgtgtccgacctcaccatgcacgagctggaggtgctgccccgcgac
ctgcagctctgctccgacatggccaccggcgtcgactcgctcggccacttccagtggggg
gacatggtgcagctcgacccgcagaccgtcggcgtcatcgtcaggctcgagaaggagaac
ttccatgttctcggcatgcaaggcaaagtgatcgaatgtaagccacaagctttgcagaag
cggcgtgaaaacagatttactatggcccttgactcagaacagaatacgattcagaagcgt
gatatcgtgaaagtaatcgacggaccgcatgccggacgtaacggagaaatcaagcatctg
tacagaaacttcgcgtttctgcaatctcgtatgtacttggataacggcggtatattcgtg
tgcaagacacggcacttgcagctggctggaggtaacaagaactccaacgcgtcagccggt
ctatctctgggctttatgtcaccacgcattcagtcacctatgcacccgtctggtcgcggc
ggcatgactcctcgaggacgcggcggacgcgggggtcggggcggcggggtgacgcgtgac
cgcgagcttatcggacagaccattaagatcaccggcgggccttacaagggcaacgtgggt
attgtgaaggacgccaccggcagcaccgctcgcgtggagctgcactccgcctgccagacc
atctccgtggaccgctcgcacatcgcgggcgccggcaacacgtcgcgcgacggcgccagc
tccttctacacgcgcacccccggccgcacgcccacgctcggcgcgcagacgccgacgtac
cgcgacaccggcatcaagacgcccatgcacggctccgccacgcccatctacgacgtgggc
gggcgcacgccgcactacggctcggccacgccgtcgcacgagggcgggcggacgccggca
cacggcgcgtgggacccggcggccgccgccacgcccgcgcgcccgcacgacttcgagtac
ggcgcgctggacgacgccgacgccgcctacgccgggcccttcacgccgcagacgccgggc
accatgtacggctcggaccacacgtactcgccgtaccggccgtcgccgtcgccggcgggc
tacacggccggctacccgggcacgccgtcgccgggcggctactcgccgcgctcgccgtac
gcgggcgcggacgcggcgccggactggcacaccacggacctggaggtgcgcgtgcgggcg
cacgaggactcggcgctggcggggcaggcgggcgtgctgcggggactgtcggcgggcacg
tgtgcgctgtacctgccgcaggaggaccgcgtcgtcaacgtgctggccgacctgctcgag
cccgtcgtaccgcagtccggagacaccgtcaaggtaatcgccggtgaggatcgcgaggcc
gtcggtcagctgatctccatagaaaatcaggaaggcgtcgtcaagttcggcacggatgac
atcaagatcatgcagctgcgacacctgtgcaagatgagcaccgcctag
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