KEGG   Helicoverpa armigera (cotton bollworm): 110381609
Entry
110381609         CDS       T05609                                 
Name
(RefSeq) endoribonuclease Dcr-2 isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
haw  Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:haw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:haw03036]
    110381609
Chromosome and associated proteins [BR:haw03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    110381609
   microRNA pathway
    RISC loading complex
     110381609
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 ResIII Dicer_dimer Dicer_platform DEAD Helicase_C PAZ Dicer_dsRBD dsrm
Other DBs
NCBI-GeneID: 110381609
NCBI-ProteinID: XP_049703707
LinkDB
Position
7:join(6806587..6806695,6808030..6808157,6808990..6809046,6809741..6809854,6810005..6810182,6810811..6810934,6811616..6811808,6812143..6812321,6812970..6813106,6814021..6814261,6814786..6814904,6815185..6815297,6815841..6815946,6816300..6816484,6817207..6817322,6817811..6817940,6818542..6818813,6819233..6819410,6819588..6819667,6819946..6820266,6822306..6822444,6822851..6823068,6823196..6823278,6823403..6823499,6824010..6824121,6824671..6824849,6825417..6825653,6826152..6826287,6834712..6834903,6837328..6837432,6838468..6838623,6838845..6839056,6839849..6840002,6842678..6842862,6843486..6843642)
AA seq 1813 aa
MEGEESDAVEHFKPRPYQAQLEEIAVENNTIIYLPTGSGKTFIAICLIKRFRHALKKPWG
QGGKRTFFLVNTVPLVTQQVNNNESNIPSEDMLIISHMKKVIEELCAVEGVGAYSGESGV
DYWDKDKWDAELAQHQVIVMTSQILSDMLMHQYIRIEDINLLIFDECHHAVVDHPMRLVM
KHFEVCPKENQPRVLGLTATLLNANVKTHKVEDTLHELEITFHAKIATVDELGKVLNYST
NPNEMVQTYSRTQPTEVSALVIRKLMVLHGLIAKIELPSSHSKHNIQLKNSQKNITGDPQ
KAVKAVKNMISSMIMFIEDFGLYGGALAILAYIIIFERLKRKTTTKEEEMLYKIAITHSV
DARAILLKAMDDKTGYEKIVKYSSEKVLLTLNVLKEYSPKVLDTPGVTLKVNKSRKPLSA
IIFTQQRFTAKILYNLLKDVIDTNPAEYDFLKHDFIVGFNVNPYNNTREEYYLKKASQQA
LLKFRNSDLNCLIATSVIEEGIDIPQCILVLRYDPPLEYRSYIQSKGRARSSESSYVILI
EKSQQNNFMKSYEQFQHTEQIIQRILIGSSDDRNEPTSSAIDQQLYKDEDVEPFITPNGS
RLSSVSAISLLNRYCSVLPHDQFTVIIPIWIQERVFDNNGVERRLVTIVMPIACPIKEEI
KGLPRYNLKAAKRSAALNACIKLYEAGELDPLTLLPVRYTAVDFDDSDVKSCFANWRDDD
VGDADSNLPYPGTKARVRKHRIQFPRLLNSVPEDVYYLHIIKSTTAFQEPKDSREKALYN
LLQRKEGYGLLTQQPLPRLCEFPMFMTVGEVATSIDVNYAVIKLNQKLFEIVKGFHYFLF
EQVLAIAKKFLVFEGKVNCMYVVPVKDDNGYDIDWNVMTTYTEIAPVQPTSYEERLFINV
TPENYKDCVVTPWYRVQPDSVTQPNLAVPAWQRKVERRIDRTRLLISKLHRFREGSTEPR
VMHFVKQAFLGSGVSPLRYKSRVTERIDFLKRKVCTWTNKIRKHKRRIEPETETKKSQKR
KEQYEQRYIVSNVLEYMTPQSQFDSDSYLTFADYYADKYKLEVIGEKTQPLLEVRNISSR
MNCLLPRAATINALTDKQRKLVSASQGDDKTSRGFAEVFVAEFCVKYDYPGVLWYKAIML
PSIIHRVFMLLVAHELLTEIAEKTKFGTPIRKKSTDWLPVKGSILIATNSLLAQVEEPTP
INSVDRINNAVDDDSSRRPNVLSIKDSLYRLQQKKLSKEYPWDERMEPIDIERNLSSVSV
MDVECYDEFVSAPLIASPRSNYNVRSPQSVYTHSAAISAPPAKYNDQIQLLKASATGKGP
ELRDILAALTTIKSHDTFNLERVETLGDSFLKFAASLYLYHKFPKLNEGQLTNIKCRLIS
NRNLYYAGERFNLGGRMKIDQFSPRNDFMLPGFFAPKEVEDFIAEKQIRPIFLIGVQFPH
SEVLDGNLSKESMDMVRDRYTDCDGAAEIEPRDRAQNAMQLYVHSQAVPDKSVADCVEAL
IGTYLLSGGLIGAIKVIEWMRIIPPQDDFAEYLHLRVPTAITDKKATEQDIDFLLRHCRD
DVEKILNYKFNDPSFLLEALSHPSYIRNRLTRSYERMEFLGDAILDFLITSHIFEHCGEL
KPGEMTDLRSALVNNVTFASYVVKLGLHKFLCSELNPTLDTAIVTFVEHQIQRDHEIVED
VLYMMDEEECSLAEYIEVPKVLSDIFEALVGAIYLDCGGDLQVVWSVVYRIMCKEIHDFS
CRIPQQPVKILYEKIHACPTFRKPEVIDPDIPKIRIGVTITKNDWQHTVYGIGRNKAQAK
RAAAKMALKVLGL
NT seq 5442 nt   +upstreamnt  +downstreamnt
atggaaggtgaggaatcagatgcagtggaacacttcaagccgaggccttatcaggcgcag
ctggaagagatagccgtagaaaacaacacaatcatatatttgccaacaggttctggcaag
acatttatcgcgatttgcctcatcaaaagatttaggcacgcactcaaaaagccttgggga
cagggaggcaaaagaacctttttcttggtcaacactgtgccattagtcacacaacaggtg
aataacaatgaatcaaacatacccagcgaggacatgcttatcattagccacatgaaaaag
gtaatagaagagctgtgtgctgtcgaaggcgttggtgcttatagcggtgaaagtggtgtt
gattattgggacaaagataaatgggatgccgaacttgcacaacatcaggttatcgtaatg
acgagccaaattttaagcgatatgttgatgcaccaatacatcaggatcgaagatatcaac
ctgttgatatttgacgaatgtcaccacgccgtcgttgatcacccaatgcgtcttgtaatg
aaacatttcgaggtctgcccgaaggaaaatcagccgcgagttcttggtttaacagcgacc
ctgcttaatgcaaatgtgaaaacacataaggtcgaggacacactacatgagttggagata
acgttccacgctaaaattgctaccgttgatgagctaggcaaagtgctcaactactcgaca
aatcccaacgaaatggtacaaacgtacagcagaacacagccgactgaggtgtcagcgctt
gtcattagaaaattaatggtccttcatggactaatagccaaaatagaactaccttcgtct
cactcgaagcacaatattcagttaaagaattcacaaaagaatatcactggcgatccacag
aaggcagtgaaagccgtcaaaaatatgattagttccatgattatgttcattgaggacttc
ggcttatatgggggtgcgttagctatacttgcttatatcatcatatttgaacgattaaag
cgaaaaactacgacaaaggaagaggaaatgctttataaaatagctatcacgcattcagtt
gacgcacgtgcaattctgttaaaagcaatggatgacaagactggttacgagaaaattgtg
aaatattcttctgaaaaagtactgctcactttaaatgtacttaaggaatacagtccaaaa
gtattggacactcctggtgttacactgaaagtaaacaagtcaagaaaaccgctttcggca
attatattcacacaacaaaggttcacagcgaaaattttgtacaatcttctgaaggacgta
atagataccaatccagccgaatatgacttcctgaaacatgattttattgttggttttaac
gtgaacccttacaataatactagagaggaatactacttgaaaaaagctagtcaacaagct
ttattgaagtttcggaacagtgacctcaactgcttgatagcaacaagcgtaatagaagaa
ggaattgatattccacaatgtatattggtcctgcgttatgatcctccgttagaatatcga
tcatacatccagagtaaaggtcgcgcgaggagttcggaatcgagttacgtgattctaata
gagaagtcccaacaaaataatttcatgaaaagctatgaacagttccagcacacagaacaa
attatacagaggatattgatcggtagtagcgacgaccgcaacgagccgacatctagcgcc
attgatcagcaactgtataaagatgaagacgttgaaccattcattacaccaaatggaagt
cggttatcttcagtgtcagccatatcgttgctaaaccgatattgttcagtgttgccacat
gatcaattcaccgtaattatcccaatttggatccaagaaagggtttttgataataacggg
gttgaacgcaggctggtcacaatcgtgatgccgattgcatgtcctataaaggaagaaata
aagggcttgccaaggtacaatttaaaggcggcgaaacgttcggcggcgttgaatgcttgt
ataaaactgtacgaggccggagagttggatccactaacattattacccgttcgttatact
gccgtagacttcgacgactcggatgtcaaatcatgcttcgccaactggcgagatgatgac
gtgggtgatgcagacagtaatctgccttatccaggcaccaaggcacgagtacggaagcac
aggattcagttcccacgactgctgaacagtgttccagaagacgtttactatttacacatt
attaaatccacgactgcctttcaagagcctaaagattcccgcgagaaggcgttatataac
ctactgcagagaaaagagggttatggcttattgactcagcaacctctgccgagattgtgt
gaattcccaatgtttatgacggttggagaagtagccacttccatagatgtcaactatgct
gttattaagctgaatcaaaagttgttcgaaattgtcaaaggatttcattacttcctattc
gaacaagtactggctatagccaaaaagttcttggtctttgagggcaaagtgaactgcatg
tatgttgttcccgtgaaagatgacaatggatatgatatagattggaatgttatgactacc
tatactgagatagcgccagtccaaccaacttcttatgaggaaaggctcttcataaatgtg
acaccagaaaactataaggactgtgtagttacgccttggtatcgagttcagccagatagt
gttacgcaaccaaatctagccgtaccagcgtggcagagaaaagtcgaacgccgtatcgac
cgaaccagacttctcataagcaaactacaccgcttcagggagggtagtactgaaccaaga
gtaatgcactttgtaaaacaggcgttcttggggtctggagtgagccctctcagatataag
tcccgagttacagagcgcattgacttcttgaagcggaaagtttgcacatggactaacaaa
atacgtaagcataagcgacggattgaaccagaaacagaaacaaagaaaagccagaaacgc
aaggagcagtatgaacaaaggtacattgtgtcaaatgttttggagtatatgaccccgcaa
tctcaattcgattccgattcctacttgactttcgccgattactatgccgataaatataaa
ctggaagtcattggagaaaaaacccaacctttattagaagtgcgtaacataagctctaga
atgaactgcttattaccgagagcggctactataaacgcgttgacagacaagcaaaggaaa
ctagtgtcggcctcacaaggcgacgacaagacaagtaggggctttgccgaggtatttgtc
gctgaattttgtgtcaaatacgattatcctggcgttctgtggtacaaggctataatgttg
cctagtattatacacagagtatttatgttgttggtggcgcacgaactgttgactgaaata
gctgaaaagacaaaattcggaactcctattcgcaaaaaatctaccgactggcttccagta
aagggaagtatactaatcgcaacaaactctctgcttgcacaagttgaagagccaacacct
ataaattcagttgacaggattaacaatgctgtggacgatgacagtagcagacgtcctaat
gtactttctataaaagacagtttgtaccgcctgcaacaaaagaagctcagtaaggaatat
ccatgggatgaaagaatggaaccgatcgacatagaacgtaacttgtcgtctgtgtcggta
atggacgtggaatgttatgacgagttcgtgtcggcgcctctaatcgcctctccacgttcc
aactacaatgtgagatcaccgcagtctgtttatacacattctgcggctatatctgcgcct
cctgctaagtacaacgatcaaatacagcttctcaaagcatcagccaccggcaaagggccc
gaactaagggacattctagctgcgttaacaacgataaaatctcacgataccttcaatttg
gagcgagttgagacactcggagattcattccttaagttcgcagccagcttatatctgtac
cataagttcccgaagctcaatgaaggccaactgactaatattaaatgtcggttaattagt
aacagaaacctttactatgctggcgagcggttcaatctgggaggtcgaatgaaaatagac
cagttcagtccaaggaatgatttcatgctgccagggttctttgcgccaaaggaggttgaa
gattttattgctgagaaacagattcgtccgatattcctgatcggagtacaattcccgcat
tctgaggtccttgatggcaatctatcgaaggaaagcatggatatggttcgggatagatac
accgactgtgatggtgccgcggagattgaaccccgtgaccgcgctcaaaatgcaatgcag
ctgtatgttcattcacaggccgtgcccgataagtcagtggctgattgcgttgaagcactc
attggcacctacttgttgagcggtggactgataggggccatcaaagtcatcgagtggatg
aggatcatacccccacaggatgattttgcggagtatttacacttgcgagtaccgactgcc
attacagataagaaagcgaccgagcaagacatcgatttcctattgagacattgcagagat
gatgtcgagaaaatcttaaattacaagtttaatgacccctctttcctattggaggcatta
tcgcatccatcatatattcggaacagactgactcgttcatacgaacgtatggagttccta
ggcgacgccattttggattttctaataacatcacacatttttgaacattgcggggaattg
aagcctggtgaaatgactgacttaagatcagcgctagtgaataatgtcacttttgcctcg
tatgtggtcaaacttggactgcacaaattcctttgctccgagctaaatccgactttagac
acggctatcgtgacgttcgtcgaacatcaaatacagagggaccacgaaattgttgaagat
gtactctatatgatggacgaggaagaatgtagtcttgcggaatatattgaagttcctaag
gtgctgagtgacatattcgaagcgctagtgggcgcgatatatttggactgcggcggcgac
ctacaagttgtatggtcggtagtttaccgtataatgtgtaaggaaatacatgacttctcg
tgccgtataccgcaacagcccgttaagatattgtacgagaaaatacacgcgtgccccact
ttcaggaaaccagaagtcatcgatcctgacatcccaaagatacggataggggttacaatc
acgaagaatgactggcaacacacagtctatggtattggtcgaaacaaggctcaagcaaaa
cgggctgccgcgaaaatggctcttaaagtcttgggcctttaa

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