Helicoverpa armigera (cotton bollworm): 110381936
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Entry
110381936 CDS
T05609
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110381936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110381936
Enzymes [BR:
haw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
110381936
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
110381936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
AAA_10
MMR_HSR1
ATP_bind_1
nSTAND3
AAA_21
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
110381936
NCBI-ProteinID:
XP_063895996
LinkDB
All DBs
Position
20:complement(join(9342149..9342260,9343025..9343206,9343691..9343822,9344131..9344232,9344413..9344501,9344848..9345018,9345608..9345827,9346244..9346405,9346518..9346610))
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AA seq
420 aa
AA seq
DB search
MTEVQLQEFKLDPDSELRFEVESKNEKVVLEIKSGYAELFGTELVKGNQYEFHTGAKVAV
FTWHGCTVELRGRTEVSYVAKETPMVVYLNVHAALEQQRVSAEQESTRGPVTMVVGPGDV
GKSTLTRILLNYAVRMGRRPIYVDLDVGQGHISVPGTIGALLVERPASIEEGFSQQAPLV
YHFGHNSPGENLELYNTIVSRLAEVIAERCENNKKASTSGVIINTCGWIKGAGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVVERSSTQRAESRDARIREYF
YGKRTPYYPHSFDVKFSDLKIYKVGAPSLPDSCMPLGMRAEDALTKLVSVWPSPALHHRL
LAVSFAAGPDDDVLHSNLAGFVCVTAVDMERQMLTILSPQPRPLPNTVLLLSELQYMDNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagtccagctgcaggagtttaaattggaccccgattctgagctgcgatttgaa
gttgaatccaagaacgaaaaagttgttttagagatcaagagtggttacgcagaactgttt
ggtacggaactcgtgaaaggaaaccagtatgagttccatacgggagcgaaggtagcggtg
ttcacgtggcatggctgcacggtggagctgaggggcaggactgaagtcagctatgtggct
aaagagactcctatggttgtatacctcaacgtccacgcagcccttgaacaacaaagagta
tcagcagaacaggagtccacccgaggtcccgtcaccatggtggtaggccctggtgatgtg
gggaagagcactctcacgaggatcctgctaaactacgctgtgaggatgggacggaggcct
atttatgtggatctggatgttggacagggacatattagtgtacctgggactattggagcc
ctcctggtagaaaggccagcgtcaatcgaagaaggcttcagccagcaagcaccgctggtg
taccacttcggtcacaactcccccggggagaacctggagctgtacaacactattgtgtcc
cggctggccgaggttattgcggagaggtgcgagaataataagaaagcttccacatcaggt
gtaatcatcaatacctgcgggtggatcaagggcgcggggtataaggtgctcacacacgct
gcacaggcttttgaggttgatgtaattttggtgctggacaacgagaggttatacaatgaa
ctgaagagggatatgcctaagttcgtgaaagttgtctacttaccgaagagcggaggcgtg
gtagagagatcatcgacacagcgagcggagtcgcgtgacgcgcgtatccgcgagtacttc
tacggcaagcgaacaccatattacccgcactcgtttgacgtcaagttctccgacttgaag
atatacaaggtgggcgccccatccctccccgactcgtgcatgcccctcggcatgcgagcg
gaggacgcgctcaccaagctggtgagcgtgtggccgtcgcccgcgctgcaccaccgcctg
ctcgccgtgtccttcgctgcggggcctgacgatgacgtgctgcactctaatctagctgga
tttgtgtgtgtgactgcagtagacatggaacgccagatgctgacgatcctatctccccag
ccccgtcccctccccaacaccgtactgctactctccgagctacagtacatggacaatcac
tag
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integrated database retrieval system
