Helicoverpa armigera (cotton bollworm): 110382336
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Entry
110382336 CDS
T05609
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03018
RNA degradation
haw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110382336
09123 Folding, sorting and degradation
03018 RNA degradation
110382336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
110382336
03041 Spliceosome [BR:
haw03041
]
110382336
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110382336
mRNA degradation factors
5'-3' decay
Lsm complex
110382336
Spliceosome [BR:
haw03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110382336
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110382336
NCBI-ProteinID:
XP_021198610
LinkDB
All DBs
Position
24:join(10241036..10241126,10241740..10241888)
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AA seq
79 aa
AA seq
DB search
MSRKEALSSFIQQIHGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYG
DAFIRGNNVLYISTQKRRI
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggaaagaagctctatcgtcgttcatccaacagatccacgggcggccggtggtg
gtgaagctaaacagcggcgtcgactacagaggtgtgttggcgtgcctggacggctacatg
aacattgcactggagcagacggaggagtacgtgaacggacagctcaagaacaagtacgga
gacgcgttcatccgcggcaacaacgtgctctacatcagcacacagaagcgccggatatag
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