KEGG   Helicoverpa armigera (cotton bollworm): 110382358
Entry
110382358         CDS       T05609                                 
Symbol
brr2
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110382358 (brr2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:haw03041]
    110382358 (brr2)
Enzymes [BR:haw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110382358 (brr2)
Spliceosome [BR:haw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    110382358 (brr2)
 Complex C
   U5 SnRNP specific factors
    110382358 (brr2)
SSDB
Motif
Pfam: Sec63 SNRNP200_wHTH DEAD Helicase_PWI ResIII BRR2_plug Helicase_C AAA_30 AAA_22 HTH_61 Cucumo_coat TcA_RBD
Other DBs
NCBI-GeneID: 110382358
NCBI-ProteinID: XP_063899092
LinkDB
Position
30:join(5171417..5171461,5171662..5171825,5171916..5172226,5172869..5172996,5173379..5173492,5174038..5174154,5174580..5174712,5175377..5175507,5176109..5176301,5177734..5177867,5178660..5178857,5179585..5179729,5180404..5180540,5181391..5181497,5181927..5182044,5182555..5182652,5183128..5183290,5187994..5188171,5188970..5189131,5190065..5190200,5190715..5190946,5191423..5191600,5192849..5192955,5193372..5193596,5194673..5194854,5195581..5195761,5202228..5202434,5203148..5203248,5203807..5203937,5204512..5204651,5205864..5206100,5207014..5207195,5208068..5208239,5209068..5209228,5209933..5210084,5210512..5210644,5211774..5211921,5212818..5212994,5213643..5213777,5215406..5215513,5218189..5218281,5219051..5219197)
AA seq 2146 aa
MADAAARQLQYEYKANSNLVLQADVRLIERRGRDEATGEVLSLSGKLTGTRMGDRAQRTK
PDKTEERKVKRQKRDEASYELSKSKTSRVAWADDTPGVLYRPRAQHTRHAYEMLLTFMQS
ALGDQPRDILCGACDEVLVVLKNDKLKDPEKKKEIEMLLGPVADERFALLVNLGKKITDF
NISSSAEGNTEIDETYGINVQFEESSEEDDEDAYGEVREEDKEDGEGSENEKEKDSSADE
DSDGEGKRNAIHTNLSEEQSQKRRDATLHPMDIDAYWLQRRLSRHFPDAMLSQAKSSEVL
TALAEAADDRDLENRLVLLLGYDCFEFVKLLNKYRYTVLYCTKLASSQSESERASIREEM
SKQPHLQKILAQLETGKGDDETAQQSSEAPRKRHKTEAEATSGTGQVSGNRKVLQLEELM
FAAGAHFMANKRCQLPPGSFRKQRKGYEEVHVPALKPKPFDEGETLVPVEKLPKYVQPAF
EGFKTLNRIQSRISKAALESDENLLVCAPTGAGKTNVALLCILREVGKHVNDDGTVNVND
FKMIYVAPMRSLVQEMVGNFSKRLSAYNMKVSELTGDHQLTREQIEATQLIVCTPEKWDI
ITRKGGERSFTNLVRLIIIDEVHLLHDERGPVLEALVARTLRTVEQTQEEVRLVGLSATL
PNYTDVAAFLRVKPEHGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKTMEH
AGRNQILVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAEQVKNPELR
ELLPYGFAIHHAGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIVKGTQVYS
AERGRWAELGALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLVS
KLPDMLNAEIVLGSVQSVRDAVTWLGYTYLYIRMLRQPALYGISQEKFQEDSLLELHRAD
LVHTAASLLDKAGLIRYERKSGHFQPTELGRIASHFYCTYETMQCYAQLLKPTLGEIELF
RVFSLSAEFKHIAVREEEKLELCKLMERVPIPIKESIEEPSAKINVLLQAYISQLKLEGF
ALMADMVYVTQSACRLLRAIFEIVLHRGWAQLVDKTLALCKMVDRRMWQSMSPLRQFRKM
PEEVIKKLEKKNFPWEKLYELGPNEIGELVRAPKLGKMIHKYVHQFPKLELATHIQPITR
STLRVELTITPDFHWDEKIHGQSEAFWILVEDVDSEAVLHHEYFLLKHKYCRDEHHVKLF
VPVFEPLPPQYFLRVVSDRWIAAETQLPVSFRHLILPEKNLPPTELLDLQPLPISALRNP
KYEELYNETFPQFNPVQTQVFNAVYNSDDNVFVGAPSGSGKSVIAELALLRMLSSGGGRA
VYVLPKDALADIVFADCYHKFNVKFNVKVVQLTGETATDHKLLNKGQIIVTTADKWDILS
RRWKVRKSVQSVTLFIVDALQLLGGEEGPVLEVVCSRMRYISSQIGRQIRIVALSLPLAD
ARDVSQWLGCSANCSFNFHPSVRPLPLQLHIQGFNISHAASRLAAMTKPIYNAVIRYAGN
KPCAVFVPSRRHSRLLAADLLALAAAHASPTRFLRARPDMLQPFLKRVHDKMLRETLAAG
VAYLHEGVEAGDRRLVQQLLESGAIQLCVVAAELAWALAAHVHTVIVADTHVYNGKLHAY
EQYPISTVLQMVGRACRPLEDQQAVAVLMCVQHHKTFFTKLLNDCLPLESHLDHRLHDHM
NAEIVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVETTLTDL
EQSKCIAIEDDMDVQPLNLGMIASYYYINYTTIELFSLSLTNKTKIRGLLEIISSAAEYS
ELCIRHREENIIKALAAKVPHKPTAPAGNTVKYNDPHVKAHVLLQAHLSRMQLPAELQAD
TALVLAKAIRLIQACVDVVSSSGWLSPAVAAMELAQMVTQAMWAKDSYLRQLPHFTTELV
QRCSEKGVETVFDVMELEDNARAKLLQLSPTEMADVARFCNRYPNVELTYEVKNERHLRA
GKPIVVEVSLEREDDIVGPVIAPFFPQKREEGWWVVIGDPKSNTLLSIKRVSLARSAKVR
LDFVCGSSGRHTYTLYFMSDAYLGADQEYKFTADVAEAASDSSDSE
NT seq 6441 nt   +upstreamnt  +downstreamnt
atggcggatgcggctgcgaggcagttgcaatatgaatacaaggccaactcaaatttggtc
ttgcaagccgatgtgaggcttatagagcgccgtggtcgcgatgaggccactggcgaggtc
ctatccctctcgggaaagcttactgggacgcggatgggcgaccgagcacagcgtaccaag
cctgacaagactgaagagagaaaagtcaagcgtcagaaacgcgacgaagcgtcatacgag
ctctcaaaatcaaaaacatcccgggtagcctgggctgatgacaccccgggagttctatat
cggccacgagcgcaacacacgaggcacgcttacgaaatgctgctcacattcatgcagagt
gctctcggagaccagccccgggatatcctgtgtggagcctgcgatgaggtccttgtggtg
ttgaagaatgataagttgaaagatccggagaagaagaaggaaattgagatgctgttgggc
cctgttgctgatgagcgatttgctctgctcgttaatttaggtaagaagatcacagatttc
aacatcagctcctcagcggagggtaatacggagattgacgagacatacggcatcaatgtg
cagtttgaggagtcttcagaggaagatgatgaggacgcttacggagaggtccgtgaagaa
gataaagaagacggagaaggttcggagaatgagaaggagaaagacagcagtgctgacgag
gacagtgacggagaaggcaagagaaatgccatacataccaatctttcagaagagcagtca
cagaagcgacgggacgccaccctacatcccatggatattgacgcctactggctccagcgt
cgtctctcccggcactttcctgatgccatgctgtctcaggccaagtcttctgaagtcctc
acagcattagctgaggcagccgatgacagagatctggagaacaggctcgtgttgctactg
ggatatgactgcttcgagtttgtcaagctgttgaataaatatagatatactgtactctac
tgcacgaagttggcgtcctctcagtcggagagcgagcgagcctccatcagggaggagatg
tcgaagcagccacatttgcagaagatcctcgctcagttggaaactggcaagggagatgat
gagacagcccaacaatcatccgaagccccccgcaaacgccacaagacggaagccgaagcc
acatcaggcaccggccaggtctcaggcaacaggaaggtgcttcagctcgaggagttgatg
ttcgcagccggcgcccacttcatggcgaacaagcgctgccagctgccgccaggatccttc
aggaagcagaggaaaggttacgaagaagtgcacgtgccggcgctgaagcccaagcccttc
gatgagggagaaaccttggtgccggtggagaagctgcccaaatacgtgcagcccgccttc
gaggggttcaagactttgaataggatacagagtcgcatatcaaaagcagctctagaatct
gacgagaacctcctagtctgcgctcctacaggggcgggtaagaccaacgtcgccctcctc
tgtatcctgcgggaagtcggcaagcacgtcaacgacgacggcactgtcaacgtcaacgac
ttcaaaatgatttatgtcgctcctatgcgctcgttagtgcaggaaatggtgggtaacttc
agcaagcgtctatcagcgtacaacatgaaagtatcggagttgacgggagaccaccagctg
acgagggagcagattgaggccacacagctcatcgtgtgtacgcctgagaaatgggatatt
attactaggaaaggtggcgagcgttcattcacgaacttggtacgtctgatcatcattgat
gaagtgcacctgctacacgacgagagaggacctgtccttgaagcgctggtcgccagaacc
ctcaggactgtggagcagacgcaggaagaggttcgtctagtaggtctatccgctacgtta
cccaactacacagatgtggctgcgttcctgagggtcaagcccgaacatggactgttttat
tttgacaattctttcagaccggtagccttagaacaacagtacatcggtgtgacagagaag
aaagcgctcaaaaggttccaggttatgaacgatattgtctatgagaagactatggaacat
gctggcaggaatcagattctagtattcgttcactctcgcaaagagaccggtaagacagcg
cgagcgatccgcgatatgtgtctagaaaaagatactttaggacaatttctaagggaaggc
tcagccagtatggaggtactccgcactgaagcggaacaggttaagaacccggagcttcgc
gagctgctaccgtacgggttcgcgatccaccacgccggcatgagccgcgtcgacaggacc
ctcgtcgaggatctgttcgctgacaggcatatacaggtgctggtatcaacagcaacccta
gcttggggagtgaacttacccgcccacacagtaatagtgaagggcacgcaggtgtactcg
gcggagcgcgggcgctgggccgagctgggcgcgctcgacgtgctgcagatgctcggccgc
gccggccgcccgcagtacgacactaagggagagggtatcctaataacgaaccactcggag
ctacaatactacttgtcgctattaaaccagcagttaccgatagaatctcagttggtcagc
aaactgcccgatatgttgaatgctgagattgtcttgggatctgtgcagagcgtcagggat
gctgtcacgtggctcggctacacctacctatatattcggatgcttcgtcagccagcctta
tacggcatatctcaggaaaagttccaagaagactcgctattagaactgcatagagctgat
ctcgtgcatacagctgctagtctacttgacaaggccggcctaataagatacgagaggaaa
tcgggccactttcagccgaccgaactcggtcgaatcgcatcccatttctactgcacatac
gaaacgatgcagtgttacgctcaactgctgaagccgactctaggcgagatagaattgttc
agagttttctcgttgtcggctgaatttaagcatatcgctgttagggaagaggagaaattg
gagctgtgtaagcttatggagagggtaccaatccccataaaagagagcatagaagaacca
tcagcgaagatcaacgtcctcctccaagcgtacatatcgcagctgaagctggagggcttc
gcgctgatggcggacatggtgtacgtcacgcagtccgcctgcaggctgctcagggccatc
ttcgagattgtgctgcacagaggttgggcacaactagtggataaaactctagcgctgtgc
aagatggtggacagacgcatgtggcaatccatgtcgccgctcagacaattcagaaaaatg
cctgaagaggtaataaaaaaactcgaaaagaagaacttcccctgggagaaactgtacgag
ttggggcctaacgagattggggaattagtgagagcccccaaattggggaagatgatacac
aagtacgttcatcagttccccaagttggagttggctactcatatacagccgatcactagg
tctacgttaagagttgagctgactatcacaccggatttccattgggatgagaagatccac
ggccaatcagaagccttctggatcctcgtcgaggacgtggactcggaagcggttcttcat
cacgagtacttcctcctcaaacacaaatactgtcgcgacgagcatcacgtcaagctgttc
gtgccggtgttcgagccgctgccgcctcagtacttcttgagggtcgtgtctgacagatgg
atagcagccgagactcaactgcccgtttccttccgtcacctcatcttgccggagaagaat
ctgcctcccactgaactgttggacttgcagcctctgcctatatctgctctgaggaatccg
aagtacgaggagttgtataacgagactttcccgcagtttaatccggtgcagactcaggtg
ttcaacgccgtctacaactcagacgacaacgtattcgtcggggccccatccggttccggc
aagtcggtcatagcggagctagcactcctgcgcatgctgtcgagcggcggcggccgcgcg
gtgtacgtgctgcccaaggacgcgctcgccgacatcgtgttcgccgactgctaccacaag
ttcaacgtcaagttcaatgtcaaggtagtccaactgacgggtgagacggccactgatcac
aagctgctgaacaaaggtcagattatcgtcaccacggctgataaatgggatatactgtct
agaagatggaaagtccgcaaaagcgtacaaagcgtgactctcttcatagtggacgctctg
caactgctgggcggagaagagggacccgtgttagaagtcgtctgttcgcgcatgagatat
atctcctcgcagatcggtcgtcaaatccgcatagtagccctatcactccccttagcggat
gctcgcgacgtgtcacaatggctgggctgcagcgctaactgctcgttcaacttccatccc
agcgtgaggccgctgcctctgcagctgcatatacagggcttcaacatatcccacgcggcc
tcccgtctcgctgcaatgacgaaacctatctacaacgcagtcattaggtacgcgggcaac
aagccctgcgccgtcttcgtgccgtcacgacgacactcacgcctgttggccgctgaccta
ctggccctggcagctgcccacgcctcgcctactaggttcctgagggccaggcccgatatg
ctgcagccgttcttgaagagggttcatgataagatgttacgcgaaaccctagcagctggg
gtagcatacctgcacgagggcgtggaagccggcgacagacggctcgtgcagcagctcctg
gagtccggcgccatacagctgtgcgtggtggccgctgagctggcgtgggcgctggctgca
cacgtccacactgttatagttgctgacacacacgtttacaacggcaaactccacgcatac
gagcaataccccatcagcaccgtcctacagatggtgggccgagcctgtcgccccctcgaa
gaccagcaagcagtagcagtcctcatgtgtgtgcaacaccacaagaccttcttcaccaag
ctgctgaacgactgcctgccgctagagagccacttggaccatagactacacgaccacatg
aacgcggagatcgtgaccaaaaccatagagaacaaacaggatgccgtagactatctcact
tggaccttcctgtatcgacggttgacgcagaaccctaattactataatttgcaaggcgtt
actcataggcatctctcagaccacctttcagagttggtagagacgactctaaccgacttg
gagcaatcaaagtgtatagccattgaagacgatatggacgtacaacctctcaacttgggc
atgattgcttcgtactactatattaattatactactatagaattattcagcttatctcta
acgaacaagaccaagatccgaggcctgctggagatcatatcctcagctgcggagtactcc
gagctctgcatcaggcatcgagaggagaacatcattaaggctttggctgctaaagtgcca
cacaagccgacagcgccagccggtaacacagtgaaatacaacgatcctcacgtgaaagct
cacgtgttgctccaagcgcatctgtcccgcatgcagctgcccgcggagctacaggctgac
actgcgcttgtactcgctaaggccatccgcctcatccaagcctgtgtcgacgtagtctca
agcagtggatggctatcccctgcagtggccgctatggagttagcgcaaatggtcacgcag
gccatgtgggccaaggactcttacctcaggcagctgccacacttcactaccgagctggta
cagaggtgctctgagaagggtgtagaaacagtgttcgacgtgatggaactagaagacaac
gctcgcgccaaactgttgcaactttcgccaacggaaatggcggatgtcgctcgcttctgt
aaccgttatcccaacgttgagttgacatacgaggtgaaaaacgagagacacctgcgtgcc
ggcaagcctattgtagtggaagtgtcgctagagagagaagacgatatcgttgggccggtc
atagcacccttcttcccgcagaaacgcgaggaaggttggtgggtggttatcggtgatcct
aagagcaataccctactttccatcaagagggtatctctagctaggagtgctaaggtgcgt
ctcgacttcgtatgcggcagttccggtcgtcatacctacactctctacttcatgtcggac
gcctatctcggagctgatcaggagtacaagtttacggctgacgtggctgaagccgcctcc
gactccagcgactccgagtag

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