KEGG   Helicoverpa armigera (cotton bollworm): 110382753
Entry
110382753         CDS       T05609                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110382753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haw03019]
    110382753
Messenger RNA biogenesis [BR:haw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110382753
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     110382753
SSDB
Motif
Pfam: Not3 NOT2_3_5_C
Other DBs
NCBI-GeneID: 110382753
NCBI-ProteinID: XP_021199114
LinkDB
Position
8:join(1421579..1421603,1421998..1422230,1425911..1426066,1426382..1426561,1427100..1427316,1427812..1427909,1428396..1428437,1428843..1428943,1431681..1431766,1437052..1437134,1437522..1437637,1438428..1438548,1439154..1439240,1439731..1439856,1440147..1440356,1440646..1440744)
AA seq 659 aa
MAATRKLQGEIDRCLKKVTEGVETFDDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSSWLVSSIDALNLQVDQFESEIESLLVGKKKRLDKEKQDRMEDLKLKLEKHRFHIK
KLETLLRMLDNMSVEVEQCSLVPQIKRIKEDVEYYIDSSQDPGFEENEYIYDDIRGLDDI
ELSGVGLPSSATTDSNNSNDSAGSPTSMLSGTSPVTSPTLEVHNHSTDSIDVEKKKKEEI
ITKVCDLSFSPTIHTNLPVKPLPLRAVNAGVSNSTCNVSSLLNNSAASTNSVGVAGGAAS
PPHARPSVPPPQHTNNNNTEVVENGPVSTTPAHTATHLPPAPAQPPPTSKSSSVPLLGPG
AEPASPLTVNGPSQPQHHTPQHQPNNGRVSESSSTAGAAPGSGTASLKSMAQQAVQRAGL
DQHHPQSVRRGAMLAAAHIPPLLGVAPLGPLPLNSEHQLQFQMLESSFYHMPHPSDSERM
RVYLPRNICQTPLYYNQVLLPHSDSVEFFQRLSTETLFFVFYYMEGTKAQYLAAKALKKQ
SWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggctgcgacaaggaaattacaaggtgaaatagacaggtgtttaaaaaaggttacggag
ggcgtggagacgttcgatgacatctggcagaaggtacacaatgcgacgaacagtaaccaa
aaggagaagtatgaggcagacctcaagaaggagatcaagaagcttcagaggctacgggat
cagatcaagtcgtggatcgcctccggggagattaaggataagagtacacttttagaatat
aggaaactaatagaaacacaaatggaaaggtttaaagtagtggaacgggagacgaagacg
aaggcgtattccaaggagggcctgggggcggcgcagaagctcgaccctgcgcagaaggag
cgcgaggagatgtcctcgtggctcgtctcctccatcgacgcacttaatttacaagttgat
caatttgagtctgaaatagagtcactgctagtgggtaagaagaaacgactggacaaagag
aaacaggaccgcatggaggatcttaaactcaagctggagaagcacaggttccacataaag
aagttagagacactcctacggatgctggataacatgtccgttgaagttgaacagtgttcg
ctggtcccacagataaagaggataaaggaggacgtggagtactacatcgactcgtcacaa
gaccccggctttgaggagaacgagtacatctacgacgacatccgggggctggacgacatc
gagctcagcggcgtcggcctgccctcctcagccaccaccgacagtaacaacagcaacgac
tccgcaggatctcctactagcatgctctcaggtacaagtccagtaacatcaccaacgtta
gaggtacacaatcactccacagactccatagacgtggaaaaaaagaaaaaagaagagatc
ataaccaaagtgtgcgatctgtctttttcaccgacgattcatacaaacttgccggtaaaa
cctctgccgctgcgcgcggtgaacgcgggcgtcagtaacagcacgtgtaacgttagttcc
ttgctcaataactccgcagcatccaccaatagcgtgggcgtggcgggcggcgccgccagc
ccgccgcacgcgcggcctagcgtgccgccgccgcagcacaccaacaacaacaataccgaa
gtagtggagaatggtccggtgtcgacaacacccgcgcacacggccacgcatctaccgcct
gcgcccgcgcaaccaccgccaacgtcaaagagttcgtcggtgccgctgctggggccgggc
gcggagccggcgtcgccgctcaccgtcaacgggcccagccagccgcagcaccacacgcca
cagcaccaacctaataatggtcgagtaagcgagtcgtcgagtacggcgggcgcggcgccg
ggcagcggcacggcgtcgctcaagagcatggcgcagcaggccgtgcagcgagccggcctc
gaccagcaccatccacagagcgtccgtcgcggcgcgatgctggcggcggcgcacatcccg
ccgctgctgggcgtggcgccgctcggcccgctgccgctcaactcggaacatcagctacaa
ttccaaatgttggagtcttcgttctaccacatgccccacccgtccgactcggagcgaatg
agggtgtacctccccagaaatatatgccagacgcccttatattataaccaggtgctgcta
ccgcactcagactcagtggagttcttccagcgtctgtcgacggagacgctattcttcgtg
ttctactacatggagggcacgaaggcgcagtacctcgccgccaaggcgctcaagaagcag
agctggcgcttccacaccaagtacatgatgtggttccagaggcacgaggagcccaaggtc
attaatgaggagtatgaacagggcacatatatctactttgactacgagaagtggggccag
cgcaagaaggagggcttcacgttcgagtataagtacttagaggaccgtgacttgaactga

DBGET integrated database retrieval system