KEGG   Helicoverpa armigera (cotton bollworm): 110383217
Entry
110383217         CDS       T05609                                 
Symbol
swm
Name
(RefSeq) RNA-binding protein 26 isoform X1
  KO
K13192  RNA-binding protein 26
Organism
haw  Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:haw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:haw01009]
    110383217 (swm)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haw03019]
    110383217 (swm)
   03041 Spliceosome [BR:haw03041]
    110383217 (swm)
Protein phosphatases and associated proteins [BR:haw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110383217 (swm)
Messenger RNA biogenesis [BR:haw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     110383217 (swm)
Spliceosome [BR:haw03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    110383217 (swm)
SSDB
Motif
Pfam: Nup35_RRM_2 RRM_Nup35 PWI RRM_1 zf-CCCH zf_CCCH_4 AlphaC_N2
Other DBs
NCBI-GeneID: 110383217
NCBI-ProteinID: XP_063898692
LinkDB
Position
29:join(3390014..3390072,3393329..3393447,3394108..3394245,3395716..3395837,3396390..3396464,3397041..3397144,3397710..3397805,3398316..3398456,3398956..3399062,3399730..3399855,3400440..3400545,3401269..3401363,3401917..3402050,3402624..3402755,3403239..3403394,3403924..3404089,3404630..3404748,3405300..3405344,3407392..3407469,3408681..3408784,3409154..3409180,3409517..3409670,3410475..3410603,3411069..3411170,3411813..3411902)
AA seq 907 aa
MIIENPDAFKSWLTSILEPLCDADPAALAKYVYALVKKDKPLDELREVMVDQLDVFLQQE
TKPFVEMLFKSLESNDYLKPGREEKAPSPPPAEPEPLKKPEAENHVVPNSGPASPAAGPE
PAPGSRPRLVLQPSARHAHTEHTLIKVVPLTELLEEPVDQPPRRRDRRGDSTREADRRRR
RSRSWERRARTRRHPRDNEHNNDARRRPLSRSPSPRGRYRNRSPPPPPPIDRQNSRSRSR
SPTVRDRDHERERERLRVPRELERDRMSRDREHRDRVSRSRDRERSRERSRDRSRGSTSP
RADARLEHNDAYKRRCRDFDEKGYCMRGDLCQWDHGSDPVVLEDAAAALSSVLALPPAPA
VPEYNPLTPDIWCGGFPAYPPPQPHHPHPPRELIPIPRIRQSAPVPRAAGAAPPRHPPPH
KKNFDYNRFGAGRPPLPANAANCSLEVKKVPRGLNDITHLNNHFCKFGKIVNIQVCYDGD
PEAALITFSNPTEANVAYKSTEAVLNNRFIKVFWHNPENKQENMAPSGQLANKQNDRQNS
QHPMSHNKVLINRDNIKATADNNAKQLMEKQEKEKELSNGVEPKKEVVKPSLNKSKQVME
MHKRAQALLETQLQQQMLLIQRLEQGNVTGPQRSALLEAISSAQEGIEKLRKELVAYNGT
LKQMQDESVARNLSRLQLAQAKKPKTKEEAQKEILDAELDLFTKQQEGQDVTELTKKIAE
LRRQMAIQFPSHNIMRRPHASYRIVKRKLRGGRFNTPTRFTRGGIATKMFSVNQSVDHRP
KALLISGFEADELEALITHFSQFGEVMSKEVELSVPQLVLQYKSRQHAEHAIANGKHYND
RTLSITWTANTNASTNNAARPADARPARNGEQRDDKDETPAELPEDTLLRFDEEEEDDAD
EDRSWRR
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgattattgaaaatcctgacgctttcaagtcgtggttgacctccatattggagcccctt
tgtgatgcggaccctgcagcgcttgccaagtatgtgtacgccctggttaagaaggacaaa
cctctggacgagctgcgagaggtcatggtggatcagctcgatgtgttcctccaacaagaa
accaaaccgtttgtggagatgttgttcaaatcgctggagagcaacgattacctgaagccg
ggacgtgaggagaaggcgccctcaccacccccggctgagcctgaaccgctgaagaagcct
gaagctgaaaatcatgtggtccccaattcgggtcccgcgtcgccggcggcagggcctgag
ccggcgccgggctcgcggccgcggctcgtgctgcagccctccgcccgccacgcgcacaca
gagcatacgcttattaaggttgtaccattaactgagctgctagaagaaccagtagaccag
cctccgagaagacgagacaggagaggagattcgacgcgcgaggcggatcgtcgtcggcgc
cgctctcgctcgtgggagcgtcgcgcgcgcacgcgccgacacccgcgcgacaacgaacac
aacaacgacgccaggagacgaccactatcaagatctccgtcgccgcgaggacgttacaga
aaccgcagtccccctccaccaccacctattgacagacaaaacagcaggtctagatcaaga
tcaccgacagtccgcgatcgtgaccacgagcgtgaaagagaaagactacgcgttcctcgc
gagctggagagagacagaatgtcgcgggaccgagagcatagagatcgagtgtctcgctct
agagatagggaacgatcgcgtgagagatctcgcgaccgttcccgcggctcgacgtccccc
cgcgcggacgcgcgtctggaacacaacgacgcttataagcgacgctgtcgggacttcgac
gagaaaggctactgcatgcgaggcgacctctgccagtgggaccacggcagcgacccagta
gtgctagaagatgctgcagctgctttatcttctgtgcttgcactcccaccagcccctgcc
gtgcctgaatacaacccgctaacgccggacatctggtgcggcggcttccccgcgtacccg
ccgccgcagccgcaccatccgcatccgcccagggaactcatacctatacctaggattcgt
caatcggcgccagtgccgcgtgctgcgggtgcggcaccaccgcgacatccgccgccgcac
aagaagaacttcgactataacagatttggcgccggtcgtccccctctgcccgctaacgcg
gcgaactgttcgctggaagtgaagaaagtgccgcgagggctgaacgatatcacgcatctg
aacaaccacttctgcaagttcggcaaaattgttaatatacaggtgtgttacgacggtgac
ccggaagcggcgttgatcacgttcagcaatccgacggaagctaatgttgcctacaagagt
acagaggccgttctcaacaatagatttattaaggtcttctggcataaccctgagaacaaa
caagaaaacatggcgcccagcggtcagctagctaacaaacaaaacgacagacagaattca
caacacccgatgtctcacaacaaagtgcttataaacagggacaatattaaggcgaccgct
gataataatgcaaaacagctgatggagaagcaagagaaagaaaaagaactatcaaacggc
gtggaaccaaagaaagaagtagttaaaccgtctctcaacaagagcaaacaagtgatggag
atgcacaagcgagcacaagctctgctcgagactcagctgcagcagcagatgttgctcata
cagaggctcgaacaaggcaatgtaacgggaccacaaagatcagctctgttagaagccatc
agttcagcacaggagggcatcgaaaagttaaggaaagagctcgtcgcttacaacggcact
ttgaaacaaatgcaggacgagtcggtcgccaggaatttgtcccggttgcaactagcgcag
gcaaagaaaccaaagactaaggaggaggcgcaaaaggagattctggatgctgaactcgac
ctctttactaaacaacaggaaggccaagacgtgacggagttaacgaaaaaaatcgcagag
ttacgccgacagatggctatacagttcccctcgcataacatcatgaggaggccacatgca
agctatcgtattgtgaagagaaaacttagaggcggtcgtttcaacacccccacccgtttc
acccgaggcggcatagcgaccaagatgttcagcgtcaaccagtcagtggaccacaggccg
aaagcgctcctcatctcagggttcgaagctgatgagttggaagccttgatcacgcatttc
tctcaattcggcgaagtgatgagcaaggaagtggagctatccgtgcctcagctggtgctg
cagtacaagtcgcggcagcatgctgaacatgccatcgccaacgggaagcactacaacgat
aggacactctccataacgtggacggcgaacacgaacgcgagcacgaacaacgcggcccga
cccgccgacgcgcggcccgccaggaacggcgagcagagagatgataaggacgagacacca
gcggagctacccgaagacactcttctccgtttcgacgaggaggaagaggatgacgcagac
gaggaccgctcctggcgccgttga

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